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scnpilot_solids2_trim150_scaffold_2245_curated_1

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(148..567)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1335421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium intracellulare MIN_052511_1280.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 139.0
  • Bit_score: 150
  • Evalue 1.90e-33
Ribonuclease VapC n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NFF2_KITSK similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 139.0
  • Bit_score: 68
  • Evalue 6.90e-09
PilT protein domain-containing protein; K07062 similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 141.0
  • Bit_score: 80
  • Evalue 5.50e-13

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Taxonomy

Mycobacterium intracellulare → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GTGCTCCTGATCGACAACTCGGTGTGGTCGCGGCTCCTCTCGGGCGGGGTGCCGCGGGTCCGTCTCAACGCGGTGGTCGAAAAGCTCGACGCGGGGGAAATCGCCACCTGCCTGCCATTTCTGCTCGAGGCTGGCTACTCGGCGCAGTCCGCGGCAGACCACGAGCAGAGCATCGATCGACTTGGCACCTTGCCGTCGGTATCCATCGACGCCGACATCGAGGCAACCGCACGCAAAGCGCAGCGTGAGTTGGCCCGGGCCGGTCACCATCGCCTCTCGCCGATCGATCTGATCATCGCCGCCTGCGCCCACGAGGCCGGGGCCGGTGTCCTTCACTACGACCGCGACTACGACGTGATTGCCGAGCTGACCAGCCTCCGCTTCGAGAGCGTCTGGGTCGCCCCCGCGGGCTCGCTCTAG
PROTEIN sequence
Length: 140
VLLIDNSVWSRLLSGGVPRVRLNAVVEKLDAGEIATCLPFLLEAGYSAQSAADHEQSIDRLGTLPSVSIDADIEATARKAQRELARAGHHRLSPIDLIIAACAHEAGAGVLHYDRDYDVIAELTSLRFESVWVAPAGSL*