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scnpilot_solids2_trim150_scaffold_376_curated_22

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(26955..27671)

Top 3 Functional Annotations

Value Algorithm Source
Putative HTH-type transcriptional regulator TcmR n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MEQ8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 181.0
  • Bit_score: 97
  • Evalue 1.40e-17
Putative HTH-type transcriptional regulator TcmR {ECO:0000313|EMBL:EPJ34906.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.4
  • Coverage: 181.0
  • Bit_score: 97
  • Evalue 2.00e-17
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 183.0
  • Bit_score: 96
  • Evalue 1.70e-17

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Taxonomy

Streptomyces afghaniensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGCAACGTACCGGGTCGAAAAATCCTGCAAAACCCTCGCTCCGTGAGCGCAAGAAGCTGGCAACCCGCAATGCGCTAGTCGCCACAGCCCGCCGCCTGTTCGCGGAAAAGGGCTATGAAAACACGACGCTGGAAGAAATCTGCGAAGAGGTGCAGATCCACGTCACCACCTTCTTCTCCTATTTCGCCAGCAAGGAAGAGCTTGCCTTTGCCCGCACGCTCGAAATGCTGGATATGTTTCGAGAGGGACTCAGAAACAAGCCGGATGATGTTGACGCCATGACCTATTGGTGGCGCTTCAACAATGAATTCAGCCTGCGCGCCCGCACTGAGGAAGGCACGATCATGCTCAGGATGGACAGTGTGCCTGCCCTGCGCAGCCGCTATGCCAGCATTGTGCGCCAGTATGAAGAAGAGATGGCCATCGCCTTTGCCAGAGAAGCCGGTGTCGATCCCGAGACGGATCTTTATTCCCGGCTGCGGGCCGCGGCCTTGCTGGCTGCCACGCTGGCGAGCGCGCGTTGGTATATCGCAACCTTTGGAATTGAGCCGCGCACTGCCGATACCGACCATTTCACCAAACAGGTTCTCGCAAGTTTTCCCTCCCGTGCGGTGATTGATGAAGAGTGCCGCCGTTTCAGCAAAGTGGTGCATGCCCATGCCCGCCGTGGCAGCCCCGCACCCCGCACCCAGTTGCCAAAGCGCCGCCGTTCCTGA
PROTEIN sequence
Length: 239
MQRTGSKNPAKPSLRERKKLATRNALVATARRLFAEKGYENTTLEEICEEVQIHVTTFFSYFASKEELAFARTLEMLDMFREGLRNKPDDVDAMTYWWRFNNEFSLRARTEEGTIMLRMDSVPALRSRYASIVRQYEEEMAIAFAREAGVDPETDLYSRLRAAALLAATLASARWYIATFGIEPRTADTDHFTKQVLASFPSRAVIDEECRRFSKVVHAHARRGSPAPRTQLPKRRRS*