ggKbase home page

scnpilot_solids2_trim150_scaffold_2142_curated_22

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(16469..17428)

Top 3 Functional Annotations

Value Algorithm Source
Putative branched-chain amino acid ABC transporter, periplasmic component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGF3_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 322.0
  • Bit_score: 279
  • Evalue 3.50e-72
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDO59818.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 321.0
  • Bit_score: 292
  • Evalue 5.60e-76
putative branched-chain amino acid ABC transporter, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 322.0
  • Bit_score: 279
  • Evalue 1.10e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGCTGAAGGCGGCCGAGATGGGGGTGAGCGATTCCGGCAAGCGCGATCTTCTGTTGATGCCGGTGGATGAAGGCAGCAACCCGGCCGAAACCGCCGCCGCGGCGCGCAAGCTTCTGGATCAGGGGGCGGAGATCATTATCGGGCCGTTGTTCGCCTCCGCCGTTTCCGCCGTGGCGCCCATCGCGCGCGACCGCGGTGTGCCGGTGCTCGCCTTCTCGACCGACCGCACCGTGGCGGGCCACGGGGTTTATCTGTTGAGCTTCCAGCCCGAAGACGAAGTGCGCGCGATCGTCACCTATGCCGCCAGCCAGGGCCACACCCGCTTCGCCGCGCTGACACCGCTGACCCCTTATGGCGACCGGGTGACAGCGGCTTTCCGCACCACAGTCCAGGATGTGAAAGGCACGGTTTCCGGGATCGAACGCTTCGATCCTTCGTCCGGCACCGCGGTGGCGCAATCCGCCGCCATAGCAAAGGGTCAGCCCGATTCGGTGCTGATCGCACAGGGCGGCGCGTTGTTGCGCGGCATTGCGCCGACACTGGTGGTGAACGGGCTTCCGCCGGAGACGGTCAAATATCTCGGCACCGGGGTGTGGGACGACCCCACCATTGCACAGGAACCGGCACTGCAGGGCGGCTGGTTCGCGGCCCCCACCCCCAATGCGCAGGATGGGTTCGACGCTCGCTTCCACGCCGTGTTCGGCACCACACCGCCACAGCTTGCCACGCTTCCTTACGATGCAGTGTCGCTGGTGGCGCTATTGTCGGCGGGCGAGCCCTATCATCGCTTCACCGATGCGGCCCTGACCGACCCCAACGGTTTCGCCGGTGTGGACGGGATTTTCCGCTTCTTCCCCGATGGTTCGGATGAGCGCGGGCTGGCCATTCTGCGGGTGGCACCGGACGGCTTTCAGATTCAGCAGCCGGCGCCGGCCACCTTCCAGCCCGTGGGTGGGTAG
PROTEIN sequence
Length: 320
MLKAAEMGVSDSGKRDLLLMPVDEGSNPAETAAAARKLLDQGAEIIIGPLFASAVSAVAPIARDRGVPVLAFSTDRTVAGHGVYLLSFQPEDEVRAIVTYAASQGHTRFAALTPLTPYGDRVTAAFRTTVQDVKGTVSGIERFDPSSGTAVAQSAAIAKGQPDSVLIAQGGALLRGIAPTLVVNGLPPETVKYLGTGVWDDPTIAQEPALQGGWFAAPTPNAQDGFDARFHAVFGTTPPQLATLPYDAVSLVALLSAGEPYHRFTDAALTDPNGFAGVDGIFRFFPDGSDERGLAILRVAPDGFQIQQPAPATFQPVGG*