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scnpilot_solids2_trim150_scaffold_350_curated_12

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 12830..13435

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=2 Tax=Cupriavidus RepID=Q1LPM7_RALME similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 203.0
  • Bit_score: 169
  • Evalue 4.20e-39
TetR family transcriptional regulator {ECO:0000313|EMBL:KFA91545.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 195.0
  • Bit_score: 178
  • Evalue 7.40e-42
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 203.0
  • Bit_score: 169
  • Evalue 1.30e-39

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Taxonomy

Cystobacter violaceus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
GTGGTTACGGCGATAGCACGCACCTATCTCGGATCGACGGCGGAGGAACGCCGTCTGCTGCGCCGTGAAACGCTGCTCAAGGCAGGTTGCGATGTCTATGCACAGCGCGGCTATCGCAACGCCACCGTCAAGGCGATCTGCGAGCGTGCCGGCCTGACGGAACGCTATTTCTACGAAAGCTTCCCGAACAACGAGGCGCTATTTCTGGCCTTGTTCAAGGATGTCTCGGCCAGGATGCTGGATGAGGTCCGGGCGGCGGGCGAAGCGGTTCGGGGTGACCCTGCCGGGAAGGCGCGCGCGATCCTCGAGGCTTATTATCGCGGGCTGCAGGCCGAGCCTGCACCGGCGCGTGTGTTTGTGATCGAAGCGGCCGATATCAGTCCGGCGGCACACGAAATCGCGCGGCTGACCTTTGAACGCTTCACGGATTTGCTGACGCAAGCCTGGACGAACGCCCCGGTACAACGCGATCCGGCCCTGCGCGTAGGGGTTTCAGGTGCGGTCGTACAGATCGCGCGCGACTGGATTTGCAATGGCTTTTCGCAGCCGCTGACATCCGTCGTCGATGCGGCATTGCGCATTTCCGCGGTGCTTGCAGAGCAATAG
PROTEIN sequence
Length: 202
VVTAIARTYLGSTAEERRLLRRETLLKAGCDVYAQRGYRNATVKAICERAGLTERYFYESFPNNEALFLALFKDVSARMLDEVRAAGEAVRGDPAGKARAILEAYYRGLQAEPAPARVFVIEAADISPAAHEIARLTFERFTDLLTQAWTNAPVQRDPALRVGVSGAVVQIARDWICNGFSQPLTSVVDAALRISAVLAEQ*