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scnpilot_solids2_trim150_scaffold_188_curated_10

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(10135..11103)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 309.0
  • Bit_score: 368
  • Evalue 8.00e-99
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 316.0
  • Bit_score: 359
  • Evalue 1.40e-96
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036BE620 similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 319.0
  • Bit_score: 369
  • Evalue 2.60e-99

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Taxonomy

Magnetospirillum sp. SO-1 → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
GTGCCCGCCGATATGGCGGGCTGGCGGCTCGACCGCTTTCTGGCCACGGCGGCCCACGGCCTCAGCCGCTCGCGCCTCCAGGCTCTGATTGCCGAAGGGGCCGTCAGCGAAGCCGGGCGGACGGTAAAAGACGGCAATACACGGGTCAAATCCGGCGCCTGTTATGAAATCCGCATTCCCACCCCCGCCCCCGCAGAGCCGGTGGCGCAGGCCATCCCCCTTTCCGTGATCTATGAGGATGACGAGTTGATCGTGATCGACAAGCCGGCTGGCCTTGTGGTGCATCCGGCCGCCGGTAACCCGGACGGCACCTTGGTCAACGCGCTGATCGCCCATTGCGGGGACAGCCTTGCCGGTGTCGGCGGGGTGGCGCGGCCCGGCATCGTCCACCGGCTGGACAAAGACACCAGCGGCCTTCTGGTGGCGGCGAAAACCGACCGCGCGATGGCGGGGCTGGCGAAACAATTCGCCGACCATTCGACCGAGCGGGCCTATCACGCCATCGTCTGGGGCAGCCCGCGTTTGGGCGACGGGGTGGTGGAAGGCCAGATCGGCCGCAACCCGTTCGACCGCAAGCGCATGGCGGTGCTGCGCGGACAGGGAAAGGCAGCCCGCACTCGCTACCGCGTGGTGGAACGCTTCGGCGATTCCGTGCGCCCGGTGGCCAGCCTGATCGAATGCCGGCTGGAAACAGGGCGCACCCATCAGATCCGGGTGCATCTGACCCATCTCGGCCATCCACTGATCGGCGATCAGACCTATGGCCGTGCCCGAAAACCGCCACGGGCGAAAACGAATGCGGAGGCCCGCGCCTACACCATGGCGGCGGCGTTCCCGCGTCAGGCGCTGCATGCCTGGCTTCTGGGTTTTGAACACCCGGCCAGCGGTGAAATGCTGCATTTCGAATCCGCCTGGCCCGCGGATTTTTCCAGCCTTGCGGCGGCGTTCAGAGGCTTGAACCAAACGTGA
PROTEIN sequence
Length: 323
VPADMAGWRLDRFLATAAHGLSRSRLQALIAEGAVSEAGRTVKDGNTRVKSGACYEIRIPTPAPAEPVAQAIPLSVIYEDDELIVIDKPAGLVVHPAAGNPDGTLVNALIAHCGDSLAGVGGVARPGIVHRLDKDTSGLLVAAKTDRAMAGLAKQFADHSTERAYHAIVWGSPRLGDGVVEGQIGRNPFDRKRMAVLRGQGKAARTRYRVVERFGDSVRPVASLIECRLETGRTHQIRVHLTHLGHPLIGDQTYGRARKPPRAKTNAEARAYTMAAAFPRQALHAWLLGFEHPASGEMLHFESAWPADFSSLAAAFRGLNQT*