ggKbase home page

scnpilot_solids2_trim150_scaffold_188_curated_31

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(29898..31817)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287D59C similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 644.0
  • Bit_score: 456
  • Evalue 5.40e-125
TonB-dependent receptor, plug {ECO:0000313|EMBL:EZP55016.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 630.0
  • Bit_score: 466
  • Evalue 5.60e-128
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 643.0
  • Bit_score: 454
  • Evalue 4.90e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1920
ATGCGCAAACGTGCCTTTATTTCCACTCTGATGCTTTTGGCGGGGACGGCACCCGCCGCATCCGCTGCCGATCTCGAAACCGTGGTGGTGACCGCCACCCGCAGCGCCCAGCCCGCAGCCCTGACCGGCGAATCCATTTCCGTCATCACGGCGGATGAACTGCAGCGCCAGCAGATCAGCTTCGTCAACGACGCGCTGAGCCAGGTGCCGGGCCTGACCTCAGTGCGCAATGGCGGGGTGGGCCAGAACGCCACCATCGGCGTGCGTGGCGCACCGGCGGGCCAGACCCTGGTGCTGATCGACGGCGTTCGCATCAACGACGCCAGCAGCACCGATGGCCAGGCGCTTCTGGGCGACCTTCTCTCCAACAATATCGACCGGATCGAAATTCTGCGCGGGCCGCAATCCACCCTTTACGGCAGCGACGCGATGGGCGGCGTGGTCAACGTGCTGACCAGACGCGGCGGGGACGCGCCGGTTTCCGGCACCGCGCTTGCCGAAGGCGGCTCGTTCGACACCTTTCACGCCAACGCGGCGGTGAACGGCACAGTGGACGGCATCGAATATGGCGGCGCCGTCAACAGCTATGCCACCAACAGCGTGTCGGCGGCCGACGCGCGCAACGGCAATAGTGAGGCCGACGGCTATCACAATTTCGGCGCCACCGGGAATGTGCGCGTGCCCGTCAACGATTGGGCGAGTGTCGATTTGCGCGCCTATTATGCCCACGCCCGCGGCAGTTTCGACGGCAATCCGCCACCGAGCTACACCTTTCAGGACACCCACGAATTCAATCGCAACACATTGTTCGCGGGCTATGCCGGGCTGAATATCACGGCACTGGATGGCCGCCTGCACAATCGCCTGGGCTTCATGGGCTCTTCCAGCAACCGGGAAAATTTCGATCCCACCATGGGCCCTGCCAACAATTATTTCGGCAAGGGTTCTGCCGCGCGGTTTGAATATCAGGGCGTGTTCGATCTCAATGCGAATAACCAGATCGTGTTCGGCGCCGAAAGCGAATACACCACCTTCAAGACACAGAGCGTGTTCGATTTCCCGCCGGTGCCGACACTGGGCGCGCGCCGCATCACCAGCGGTTACGGCCAGTGGCAGACCACCCTGTTCGAGCAACTGACCCTGACCGGCGGCATCCGCTATGACGGCGACAGCGAATTTGGCGGCCACACCTCGCTCAAATTCGCCGGTGCGTGGCAATTGCCGGACGGGGCGACCGTGCTGCATGCCAATTACGGCGATGGTTTCAAGGCGCCGACACTTTATGAAATGTACTCGCAATATTCCAATCCACTGCACGCGCTGGCACCCGAAACCGCGCGCGGCTGGGAAGTGGGTGCGGCGCGGCAATTCCTGAACGGCGATCTCAGCGCCAGCCTGACCTGGTTTTCGCGCCATACCCACAACCAGATCGATTTCGTTTCGCCGCCCTGTTTCACCGCACCGGCACCCGCCATCTGCGCCGTGCGCCCGTTCGGCTATTATGAAAATCTGGTCGAAACGCGCGCCCGCGGTATCGAGGCGGAAATCGTGGCGCAACTGCCATGGGATGTTGCAGCGCACGTCAATTACACCTTCCTCGACACGCGCGATGAAGGAACACTGGCGCCGCTGGCACGGCGGCCCGCCCATAGCGGCAATGCCGGTCTGGTCTGGACACCCATGCCGGGGGCCACGCTGGGCACCGAAATCGCCTATATCGGGCCGCGCTTCGATTCACCGGCCAAAGGCGGCCATCTGCCGGGTTATGCGCTGGTCAATGTTTTCGGCGAATACCCGGTGGCGGCGCATCTGACGCTGTTCGGACGGATCGAAAACCTGTTCGACCGGCATTATGAGCCGGTTCTGGGCTATGGCGCGGCCGGGCGCGCAGCCTATGCGGGCCTTCGCGTGGCCTTCTAG
PROTEIN sequence
Length: 640
MRKRAFISTLMLLAGTAPAASAADLETVVVTATRSAQPAALTGESISVITADELQRQQISFVNDALSQVPGLTSVRNGGVGQNATIGVRGAPAGQTLVLIDGVRINDASSTDGQALLGDLLSNNIDRIEILRGPQSTLYGSDAMGGVVNVLTRRGGDAPVSGTALAEGGSFDTFHANAAVNGTVDGIEYGGAVNSYATNSVSAADARNGNSEADGYHNFGATGNVRVPVNDWASVDLRAYYAHARGSFDGNPPPSYTFQDTHEFNRNTLFAGYAGLNITALDGRLHNRLGFMGSSSNRENFDPTMGPANNYFGKGSAARFEYQGVFDLNANNQIVFGAESEYTTFKTQSVFDFPPVPTLGARRITSGYGQWQTTLFEQLTLTGGIRYDGDSEFGGHTSLKFAGAWQLPDGATVLHANYGDGFKAPTLYEMYSQYSNPLHALAPETARGWEVGAARQFLNGDLSASLTWFSRHTHNQIDFVSPPCFTAPAPAICAVRPFGYYENLVETRARGIEAEIVAQLPWDVAAHVNYTFLDTRDEGTLAPLARRPAHSGNAGLVWTPMPGATLGTEIAYIGPRFDSPAKGGHLPGYALVNVFGEYPVAAHLTLFGRIENLFDRHYEPVLGYGAAGRAAYAGLRVAF*