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scnpilot_solids2_trim150_scaffold_920_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_920_curated_1
unknown

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comp(3..227)
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_920_curated_2
Alloprevotella rava, Alloprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1252..1506
DNA (255bp) protein (85aa)
30S ribosomal protein S20 n=1 Tax=Alloprevotella rava F0323 RepID=G5GCF4_9BACT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=679199 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Alloprevotella.;" source="Alloprevotella rava F0323.;"
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
scnpilot_solids2_trim150_scaffold_920_curated_3
Leptospira kmetyi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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1565..3427
DNA (1863bp) protein (621aa)
Glycoside hydrolase, family 31 {ECO:0000313|EMBL:EQA54000.1}; EC=3.2.1.- {ECO:0000313|EMBL:EQA54000.1};; TaxID=1049970 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kmetyi serovar Malaysia str. Bejo-Iso9.;"
malZ; alpha-glucosidase; K15922 alpha-glucosidase [EC:3.2.1.20]
Glycoside hydrolase, family 31 n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6HN70_9LEPT
scnpilot_solids2_trim150_scaffold_920_curated_4
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3429..4775)
DNA (1347bp) protein (449aa)
UDP-N-acetylmuramate-alanine ligase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPL2_SOLCM
UDP-N-acetylmuramate-alanine ligase
UDP-N-acetylmuramate-alanine ligase {ECO:0000313|EMBL:AFD05910.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_920_curated_5
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4907..5482)
DNA (576bp) protein (192aa)
Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74499.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
pentapeptide repeat-containing protein id=4527977 bin=GWF2_Bacteroidetes_40_13 species=Pedobacter agri genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
putative low-complexity protein
scnpilot_solids2_trim150_scaffold_920_curated_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5485..6225)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Flavobacterium sp. MS220-5C RepID=UPI0003655350
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_920_curated_7
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6267..7190
DNA (924bp) protein (308aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
Epoxyqueuosine reductase n=1 Tax=Joostella marina DSM 19592 RepID=I3C524_9FLAO
hypothetical protein
scnpilot_solids2_trim150_scaffold_920_curated_8
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7231..7692
DNA (462bp) protein (154aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003811927
Thioesterase superfamily protein {ECO:0000313|EMBL:ACU04531.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_920_curated_9
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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7829..12646
DNA (4818bp) protein (1606aa)
gliding motility-like protein (EC:3.2.1.-)
Putative uncharacterized protein id=4626135 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_920_curated_10
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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12740..14737
DNA (1998bp) protein (666aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AQ50_FLELS
Dehydrogenase {ECO:0000313|EMBL:KIF34751.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
scnpilot_solids2_trim150_scaffold_920_curated_11
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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14818..15606
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EHA8_9SPHI
Contig29, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77720.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
integral membrane protein TerC
scnpilot_solids2_trim150_scaffold_920_curated_12
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

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15662..16783
DNA (1122bp) protein (374aa)
hypothetical protein MsalJ2_03089 id=2578174 bin=GWF2_Bacteroidetes_40_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
scnpilot_solids2_trim150_scaffold_920_curated_13
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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16947..20525
DNA (3579bp) protein (1193aa)
CHU large protein; uncharacterized id=3972976 bin=GWF2_Bacteroidetes_29_10 species=Flavobacteriales bacterium ALC-1 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_920_curated_14
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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20550..21299
DNA (750bp) protein (250aa)
3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-ACP synthase n=1 Tax=Segetibacter koreensis RepID=UPI0003684B98
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KGE87923.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
scnpilot_solids2_trim150_scaffold_920_curated_15
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(21303..23075)
DNA (1773bp) protein (591aa)
Putative uncharacterized protein id=3854695 bin=GWF2_Bacteroidetes_38_335 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
PKD domain-containing protein
Tax=GWA2_Bacteroidetes_30_7_curated
Displaying 15 items

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