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scnpilot_solids2_trim150_scaffold_399_curated_23

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(28476..29369)

Top 3 Functional Annotations

Value Algorithm Source
RmlD {ECO:0000313|EMBL:KEI67009.1}; EC=1.1.1.133 {ECO:0000313|EMBL:KEI67009.1};; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126/8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 287.0
  • Bit_score: 235
  • Evalue 9.80e-59
dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 285.0
  • Bit_score: 225
  • Evalue 3.00e-56
dTDP-4-dehydrorhamnose reductase n=1 Tax=Cyanothece sp. (strain PCC 8802) RepID=C7QQ11_CYAP0 similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 285.0
  • Bit_score: 225
  • Evalue 9.40e-56

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Taxonomy

Planktothrix agardhii → Planktothrix → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGAATTCATATAGCAACCCTCGCTTATTGGTAACTGGAGCCACAGGATTTTTAGGAAGTAGTTTATTGCCCATTGCGCTTGAAAACTATGAAGTACATTACATTGTTCACGAAAATCTAAGCCCATTTAGCAACGCCTATCCGCATCAAGTTTCGCTCAATGATTTTTCTACACTTGCGCGAGTTATTCGCCAAATAAAACCAAGTATAATTTTACACTTGGCTGCTGTAACCGATGCGAATTTTTGCGAAGTTTTTCCATGGAGTGCCTGGAAAATAAATGTAGAAACAACCAAACACTTAGCACTAATTGCAGCACAAGAAAATATTAAACTTTGCTTTGCTTCTACCGATATGGTTTTTGATGGCGAAAAAGGAAATTATACGGAAACAGATGTGGCTACACCGATAAGTAAATATGGAATACAAAAGGTAGAAGCGGAAAAAATAGTTTTAAATGCTTCATCACAAAATGCAATTTTTCGTTTGCCGCTTATGTTTGGCTCACTTGCGAAGAAAAATTATTTTGCACATGTAATTACAGCATTAAAAGAACAGAAACCTATAAAATTATTTACTGATGAGTACCGCACCATTTGTGGTGTTGAAAGTGTAGCAACTGGCATTATTACGCTTTTAGAAAAAGCAAACGGCATTTTCCACTTAGGCGGACCACAAAGAATTTCGCGCTATGAATTTGGATTGCTTGCGGCTAAAATTTTTAAGTTAGATAGCCATTTAATTATGCCATGCTTGCAATCTGAAATTAAAACTACAGCGCCTCGCCCAAAAGATGTATCGCTAAATTCAACAAAGGCTATATATTTGGGTTTTAGACCAAAAGGTTTAGAAGAAGAACTACGCATAATTGCGCATGAAGCAACTCTCTCTTAA
PROTEIN sequence
Length: 298
MNSYSNPRLLVTGATGFLGSSLLPIALENYEVHYIVHENLSPFSNAYPHQVSLNDFSTLARVIRQIKPSIILHLAAVTDANFCEVFPWSAWKINVETTKHLALIAAQENIKLCFASTDMVFDGEKGNYTETDVATPISKYGIQKVEAEKIVLNASSQNAIFRLPLMFGSLAKKNYFAHVITALKEQKPIKLFTDEYRTICGVESVATGIITLLEKANGIFHLGGPQRISRYEFGLLAAKIFKLDSHLIMPCLQSEIKTTAPRPKDVSLNSTKAIYLGFRPKGLEEELRIIAHEATLS*