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scnpilot_solids2_trim150_scaffold_1744_curated_2

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(1161..1694)

Top 3 Functional Annotations

Value Algorithm Source
transcription antitermination protein NusG n=1 Tax=Lewinella cohaerens RepID=UPI00035F2911 similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 182.0
  • Bit_score: 201
  • Evalue 5.10e-49
NusG antitermination factor; K02601 transcriptional antiterminator NusG similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 181.0
  • Bit_score: 201
  • Evalue 2.10e-49
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 181.0
  • Bit_score: 201
  • Evalue 9.40e-49

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 534
ATGGCTGAAAGCAAAAAGTGGTACGTAGTGCGCGTTATCAGCGGACAAGAAAAAAAAATTAAAGACCACATTAAATTAGAAATTTCTCGCGCTAAGTGGGACGAAATTATCTCTGAAATTCTTATCCCAACCGAAAAAGTTTACACCATTAGAAATGGCAAAAAAACCATAAAGGAAAAGAATATGTTTCCGGGCTATATCTATATGGAAATAGATACTGCCAAAATAAACAACGATATTCTTAGCCAAATAAAACAAGTACACGGTGTGCTTCAATATTTGGGAACACTTAGCCATGCAGAAGCCTTAAAACTTCTTGGAAAAGCTGATGAACTTTTAGATACCGGTGAACAATTAGCTGAGCCATTTATCATTAACGAAGACGTGAAAATTATTGATGGTCCATTCAATGGTTTTATCGGTTCGGTTGAAGAAATTCACAACGATAAAAAGAAGCTAAAGGTAGAAGTAAAGATATTTGGCAGAAAAACACCTGTGGAAGTTACCTTTATGCAGGTAGAAAAAATTGCCTAA
PROTEIN sequence
Length: 178
MAESKKWYVVRVISGQEKKIKDHIKLEISRAKWDEIISEILIPTEKVYTIRNGKKTIKEKNMFPGYIYMEIDTAKINNDILSQIKQVHGVLQYLGTLSHAEALKLLGKADELLDTGEQLAEPFIINEDVKIIDGPFNGFIGSVEEIHNDKKKLKVEVKIFGRKTPVEVTFMQVEKIA*