ggKbase home page

scnpilot_solids2_trim150_scaffold_100_curated_1

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 592..2400

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHQ8_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 27.6
  • Coverage: 134.0
  • Bit_score: 65
  • Evalue 1.90e-07
Secreted and surface protein containing fasciclin-like repeats {ECO:0000313|EMBL:GAO31885.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 25.8
  • Coverage: 260.0
  • Bit_score: 66
  • Evalue 1.60e-07
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 134.0
  • Bit_score: 65
  • Evalue 6.10e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1809
ATGAAAAAAATTCTTCTCTCGTTTGGTGCTGCCTTAACTATGTTTTCGGCATCAGCCCAAATAAAACTACTTTTATTGAACAATAGTCCCGATACGGCAGCCGCCAGTGTAGATGTGTATGTAAAGAATGCAAACTTGCCTGGAGGTGAACAAAAAATTATTGATGACTTCGGTTTTAGAACTGCATTTTTTTATGATCCGGGATTTCCAGTTATTCCAACACCTACAGATGTAGTAGTTGCACCTAAGGGCAGCTCGTCTTCTGCTGATGGTTTCTATACTAAGAGTTTCCCTTCTGGTATTGCAGCAGGAAATTATTTTTTAGTTTTAAATGGTTTGGTTGATACCAACTATGCTGCAACTCCAAACCCTTCAAGTTTACCTCGTGATTTTAATTTAGAGGTTGTATCTGGCGTAAGTTTCACTTCAAGCAATACTTCGGAAATGGCTTTAACCTTACACAATGGTGTGGTTGATGCACCTGCACAAACTGTACAATCTTTTATCACTACAATTCAAATAACACCACGCGATACCGTTGAAGATAATTTAGCTTACGGTTCTACAACAACTTCGGCTCAATATCCTGCAGCACCTAAGCGCTTGCACTATCACACTACAGGAACCTCTACACCGAGCTATCAAGCCAATGGTAACTTTTTCGGAAGTTTTGGTAATCAAGCTGTAGTTGTGTTTACGTCTGGTTTAGTTAATCCACCTGCGGGCGGTGCTACATTTGGTGTGTTTGCCATTCAGCTCCCAGCTGGACAAGCAAATGGACTGGTTCAAGTTTCAGAATTACCTAAAGAAAAAGTAGCAGGTGTGGTTCAAGTTTATCACAATGCTGCTGATCCGGCTCTTAAAGATGTTGATTTATATGTTGGTGGAATTAAGCAAGTAATCGGACTAAGTTTTCGTAAGGCTTTCCAATCAGCAGGTTTTATTCAAGACTTTGATTACAGTATAGATTTACATAAAAAAGACTCTTCAAGCAGTGTTTTAAATACTAATTTGGTATTTGGTGATGATAGCGTAGTAGCTGTGGTTTCAGGCGTATTAAATGCTTCACAATTTAAAGCAAACCCAGATGGCGAAGCTACAGATTTGAATTTTTACTTAAACGAACCGGCTAGAATTTCTGCTGCTACAGGAACTACAAGAATGACCTTGTTTAATGGCTCAACTGATGCTGCTGAAGTTTCAATTTCTGCACCGGCTTTGGGTGGAATGGTATTAGCTCCAGCTACTAAATATGGTAAATTTACACTTGTTGCTCCAACCGGTATCGGAGCAGATTTGCCTACGAGCTTAGGTAAAGTAGTGGTAGATTTAAAAATTGATACTACACTTTACAAATCATACTTAGTGCCATTAACTTCTTTTGATGGCAAAGCGGTAACAGTTTGTACTTCAGGTTTCTTAGATACTGCAAATAACCAAAATGGAGCTTCGTTTAGAGTTTTTGCAGGTGTACCAGCTTCACCATTCCCGGCTGTTATTTTCTTGCAAGATACATCAATTACAACCAGCATTACCAATCCGGCTACTGCTGATATGTCTTTCCGCATGTTTCCAAATCCAGCATCAAGCGAATTGGTGTTAGGTTTTGATTTGAAAGACCAAGCAAATGTTTCTATCGAAATATTAGACTTAAATGGAAAAGTTGTACAAACAGTTTTAAACGATACTTTCTTGGCTGGTACTACTTACCACACAGAGAGTGTTAGCAGCCTTTCAAACGGACTTTATTTTGCACGTGTGAAAAGCGGGAATGCCGTTTCTACCTATAAATTCAATGTTCTTCGCTAA
PROTEIN sequence
Length: 603
MKKILLSFGAALTMFSASAQIKLLLLNNSPDTAAASVDVYVKNANLPGGEQKIIDDFGFRTAFFYDPGFPVIPTPTDVVVAPKGSSSSADGFYTKSFPSGIAAGNYFLVLNGLVDTNYAATPNPSSLPRDFNLEVVSGVSFTSSNTSEMALTLHNGVVDAPAQTVQSFITTIQITPRDTVEDNLAYGSTTTSAQYPAAPKRLHYHTTGTSTPSYQANGNFFGSFGNQAVVVFTSGLVNPPAGGATFGVFAIQLPAGQANGLVQVSELPKEKVAGVVQVYHNAADPALKDVDLYVGGIKQVIGLSFRKAFQSAGFIQDFDYSIDLHKKDSSSSVLNTNLVFGDDSVVAVVSGVLNASQFKANPDGEATDLNFYLNEPARISAATGTTRMTLFNGSTDAAEVSISAPALGGMVLAPATKYGKFTLVAPTGIGADLPTSLGKVVVDLKIDTTLYKSYLVPLTSFDGKAVTVCTSGFLDTANNQNGASFRVFAGVPASPFPAVIFLQDTSITTSITNPATADMSFRMFPNPASSELVLGFDLKDQANVSIEILDLNGKVVQTVLNDTFLAGTTYHTESVSSLSNGLYFARVKSGNAVSTYKFNVLR*