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scnpilot_solids2_trim150_scaffold_1450_curated_1

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(151..4488)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 999.99
  • Bit_score: 2097
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2 similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 999.99
  • Bit_score: 2097
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG7_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 999.99
  • Bit_score: 2097
  • Evalue 0.0

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4338
ATGGCTAAAAAAGAAAATCGGCTAAATTCTAACTTTTCAAAAATCACTATTATGTTGGCAAGTCCAGATTCGGTATTGGACAGAAGCCACGGTGAAATTAAAAAACCCGAAACGATAAACTACAGAACTTACAAACCCGAAATGGAAGGTTTGTTTTGCGAAAGAGTATTCGGACCTACCAAAGATTACGAATGCTACTGCGGTAAATACAAGCGCATTAGATACAAAGGTATAGTTTGCGACCGTTGTGGAGTAGAAGTTACCGAAAAGAAAGTGCGCAGAGAGCGCATGGGGCATATTAACCTTACTGTGCCTATTGTGCATATTTGGTATTTTAAGAGCTTGCCTAATAAAATTGGTTATTTGTTAGGAATGGGTTCTAAGAAATTAGAAAGCGTTATTTATTACGAGCGTTATGTTGTAATTCAACCGGGAAATACATCAAACGGTGTGATGCTTCAAACTGAAAAAGGAGAGGAGGAGCGCCAATTAGCTTACTTAGATTTACTTACTGAAGAAGAATATCTTTCTGTTTTCGACAATGAAAGCATGAAAAACAACTACCAACTTGAAGATACAGATCCAAACAAGTTTGTAGCAAAAATGGGTGCTGAAGCAGTAAAAGAATTATTAAGTCGCATCAATTTAGATGAGTTAAGTTACCAATTGCGCCATGCTGCTGCGAATGAAACTTCGCGCCAGCGTAAGAGCGAAGCTTTAAAGCGCTTGAGCGTGGTAGAAGCTTTTAGAGAAGCAAATGAACATATTGAAAACCGCCCTGAATGGATGGTAGTTCAGCATTTGCCGGTTATTCCACCGGAATTGCGCCCGTTAGTGCCATTAGATGGCGGACGTTTCGCATCTTCAGACTTAAACGATTTATATAGAAGAGTAATTATTCGTAACAACCGTTTAAAGCGATTGCACGAAATTAAAGCTCCTGAAGTGATTTTGCGTAACGAAAAACGCATGTTGCAAGAAGCGGTAGATTCACTTTTCGATAACTCTCGTAAATCAAATGCCGTAAAAGCAGAAGGTGGTCGCCAATTGAAATCGTTAAGCGATGTGCTTAAAGGAAAACAAGGACGTTTCCGTCAAAACCTTTTAGGTAAACGTGTTGATTACTCTGGTCGTTCGGTAATTGTAGTTGGTCCTGAATTAAAATTGCACGAGTGCGGTTTGCCAAAAGATATGGCTGCCGAATTATTCAAACCATTTATTATTAGAAAACTTACTGAGCGCGGTATTGTGAAAACAGTAAAAAGCGCTAAGAAATTAGTAGATAAAAAAGAGCCAATTATTTGGGATATTCTTGAAAACGTATTGAAAGGGCACCCAATTTTATTAAACCGTGCCCCAACGCTTCACAGACTTTCAATTCAAGCTTTCTTGCCTAAATTGATTGAAGGAAAAGCGATTCAACTGCACCCATTGGTATGTAGTGCATTCAACGCAGACTTTGACGGTGACCAAATGGCGGTTCACGTTCCACTTGGAAACGCTGCGGTTTTAGAAGCTCAAATGCTAATGTTGGCTTCTCACAATATTTTGAACCCACAAAACGGTACACCAATCACACTTCCTTCACAAGACATGGTGTTGGGTTTGTACTACATGACCAAGTCTAAACTAAGCACCGAAACTGAAAAAGTGAAAGGTGAAGGTTTAACTTTCTACGGAGCAGAAGAAGCTGTTATTGCTTTCAACGAAAAGAAAGTAGAACTAAATGCAGTTGTGAAATGCCGTGTGAGAGTAGTTGAAAATAACGAAGCTAAATATAAAGTTTTAGAAACTACTTTAGGTAGAATTATTTTGAACCAAGTAGTACCTGAAAAAATTGGCTACGTAAACAAATTACTTGGTAAAAAAGAGTTGAAGAATGTAATCGGAAATATCTTAGCGAAAACGGATATTCCTACTACTGCGAAATTCTTAGATGATATTAAACGCTTAGGTTTCTTCTTCTCATTTAAAGGAGGATTGAGCTTTAATATTAGTGACGTGTTAGTGCCAAACGAAAAAGAAAAATTAGTAGCACAAGCTCAAGAAAAGGTAGATGAAATTACTGATAGCTACCAAATGGGTTTAATTACCGACAAAGAACGTTTTAACCAAGTAGTTGATATTTGGACACATGCCGATAACCAACTTACTATCAAACTCATGAATCAAATTACTAAAGACCGTCAAGGTTTCAATAGTATTTTCATGATGCTGGATTCAGGTGCGAGAGGTTCTAAGCAGCAGATTAAGCAGCTTTCGGGAATGAGAGGTTTGATGGCTAAACCGCGTAAAGCCGGCACAACAGGAGCGGAGGTTATCGAGAACCCGATTCTTGCAAACTTTAAAGAAGGCTTGAGCGTATTGGAGTACTTTATCTCTACACACGGTGCGCGTAAAGGTCTTTCGGATACAGCTTTAAAAACTGCCGATGCAGGTTACTTAACCAGAAGATTGGTAGATGTGGCGCAAGATGTGGTAATCACAGAAGAAGATTGCGGTACATTAAGAGGTATTGCTGTAAGTGCAATTAAAAATGGAGACGAAATTGTTGAATCTCTTTCTGATAGAATATTAGGACGTTCATCTTTGGTTGATATTTTCCACCCTGAAACTGACGAATTGTTAGTAGCAGCAGGTACACATATTAACGAAGTTGAAGCTAAATTGGTTGAAAGTTCAGGACTTGAAACTGTAGAAGTTCGCTCGGTGCTTACTTGCGAAGCTCGCAAAGGCGCTTGTGTAAAATGCTACGGAAGAAACTTAGCTACCAACCGTGTGGCAGAAGAAGGCGATTCAGTTGGAATTATTGCTGCACAATCAATCGGGGAACCTGGAACACAGCTTACACTACGTACCTTCCACGTGGGTGGTATCGCCAGCTTAGGTACTTCAGAATCTAAATTGAGAGCAAACTTTGATGGTGTGCTTCAATTGGACGGAGTTCGTGTAATAGCTGCTACCGATGAAAATGGTGAAAAACAAACTATTGTAATTGGTAGAACGGGCGAATTAAGAATTGTGAAGCCGGAAAGCGACAAAATATTGCAAGTAGCACACGTTCCTTATGGCTCTATAATTAGCTTTAAAGATGGACAAAAAGTAGGCAAAGGCGATGAAATTTGCAGATGGGATCCGTATAACAACGTTATTGTTTCTGAAGTAAATGGTAAAATTCGTTTTGAAAACATTATTGCCAACGTAACTTACCGTGATGAAATGGACGAACAAACAGGCCACCACGAGAAAGTAATTACAGAAACAAAAGACAAAACCAAAGCACCAACTATTGTAGTTGAAAGCGGAAAAGATTGGAAAAATTATAGCTTACCTGTGGGAGCGCACCTTTCAATTGAAAATGGTGAAACAGTGAAACCAGGTCAAATACTTGCTAAAATTCCACGTGTAACAGGTAAAGTAAAAGATATTACCGGAGGTCTTCCACGTGTTACCGAGTTGTTTGAAGCAAGAAATCCAAGTAACCCGGCTTCAGTAGCTGAAATTGATGGCGTGGTTAGATTTGGTGGTATCAAACGCGGTAACAGAGAAGTAATTATCGAAAGCAAAGACGGTGAAATAGTAAAATATTTAGTGCCACTTTCTAAACAAATATTAGTTCAAGAGCAAGATTTTGTACGCGCAGGAACTCCGGTTTCTGACGGTGCAATTACGCCTACTGATATTTTGAATATTAAAGGACCATTTGCAGTTCAAGAATATTTGGTAAATGAAATTCAAGATGTTTATCGCCTTCAAGGTATAAAAATCAACGATAAGCATATAGAAGTAATCGTTCGCCAAATGATGAACAAAATGATTATTGAAGATGCCGGAGATACCAAATTCTTGGAAGGCGAACAAGTTGAGAAATTCAATTTGTTAGATGCTAACGACCAATTATTTGATAAGAAAGTTGTAACAGAAGCGGGTGATTCTGAAACACTAAACCAAGGACAAATTGTAACCTTACGTAAAGTGCGCGAAGAAAACTCTTTATTGAAACGTAACGATAAAAAGTTAGTTGAATTTAGAGATGCCATTCCCGCAACAGCTACTCCTAAATTGCAAGGTATCACTCGTGCTTCATTAAGTACTGCTTCATGGATTTCTGCGGCTTCGTTCCAAGAAACAACCAAAGTATTAAGTACTTCTTCTATTGCAGCTCGCCAAGATTATTTAGAAGGATTAAAAGAAAACGTTATTGTGGGACACAGAATTCCTGCAGGAACGGGTTTAAGAAAATTCTCTAAAATATTTGTTGCTTCTAAAGAAGATATGGAACGCGTAGAAAAACAAACGCAAGATGTGCAAGAAAGCGGTGTTGAGTTGATTGGATAA
PROTEIN sequence
Length: 1446
MAKKENRLNSNFSKITIMLASPDSVLDRSHGEIKKPETINYRTYKPEMEGLFCERVFGPTKDYECYCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHINLTVPIVHIWYFKSLPNKIGYLLGMGSKKLESVIYYERYVVIQPGNTSNGVMLQTEKGEEERQLAYLDLLTEEEYLSVFDNESMKNNYQLEDTDPNKFVAKMGAEAVKELLSRINLDELSYQLRHAAANETSRQRKSEALKRLSVVEAFREANEHIENRPEWMVVQHLPVIPPELRPLVPLDGGRFASSDLNDLYRRVIIRNNRLKRLHEIKAPEVILRNEKRMLQEAVDSLFDNSRKSNAVKAEGGRQLKSLSDVLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHECGLPKDMAAELFKPFIIRKLTERGIVKTVKSAKKLVDKKEPIIWDILENVLKGHPILLNRAPTLHRLSIQAFLPKLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLGNAAVLEAQMLMLASHNILNPQNGTPITLPSQDMVLGLYYMTKSKLSTETEKVKGEGLTFYGAEEAVIAFNEKKVELNAVVKCRVRVVENNEAKYKVLETTLGRIILNQVVPEKIGYVNKLLGKKELKNVIGNILAKTDIPTTAKFLDDIKRLGFFFSFKGGLSFNISDVLVPNEKEKLVAQAQEKVDEITDSYQMGLITDKERFNQVVDIWTHADNQLTIKLMNQITKDRQGFNSIFMMLDSGARGSKQQIKQLSGMRGLMAKPRKAGTTGAEVIENPILANFKEGLSVLEYFISTHGARKGLSDTALKTADAGYLTRRLVDVAQDVVITEEDCGTLRGIAVSAIKNGDEIVESLSDRILGRSSLVDIFHPETDELLVAAGTHINEVEAKLVESSGLETVEVRSVLTCEARKGACVKCYGRNLATNRVAEEGDSVGIIAAQSIGEPGTQLTLRTFHVGGIASLGTSESKLRANFDGVLQLDGVRVIAATDENGEKQTIVIGRTGELRIVKPESDKILQVAHVPYGSIISFKDGQKVGKGDEICRWDPYNNVIVSEVNGKIRFENIIANVTYRDEMDEQTGHHEKVITETKDKTKAPTIVVESGKDWKNYSLPVGAHLSIENGETVKPGQILAKIPRVTGKVKDITGGLPRVTELFEARNPSNPASVAEIDGVVRFGGIKRGNREVIIESKDGEIVKYLVPLSKQILVQEQDFVRAGTPVSDGAITPTDILNIKGPFAVQEYLVNEIQDVYRLQGIKINDKHIEVIVRQMMNKMIIEDAGDTKFLEGEQVEKFNLLDANDQLFDKKVVTEAGDSETLNQGQIVTLRKVREENSLLKRNDKKLVEFRDAIPATATPKLQGITRASLSTASWISAASFQETTKVLSTSSIAARQDYLEGLKENVIVGHRIPAGTGLRKFSKIFVASKEDMERVEKQTQDVQESGVELIG*