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scnpilot_solids2_trim150_scaffold_116_curated_58

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(61689..62255)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=4488749 bin=GWF2_Bacteroidetes_35_48 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 184.0
  • Bit_score: 227
  • Evalue 1.60e-56
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 188.0
  • Bit_score: 208
  • Evalue 1.80e-51
Tax=GWF2_Bacteroidetes_35_48_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 184.0
  • Bit_score: 227
  • Evalue 2.20e-56

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Taxonomy

GWF2_Bacteroidetes_35_48_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGAGCGATAATGAACTATTAGATTTATTTCATTCCGGGCAAAGAGAAAAGGCTTTCACTTTGCTCATGGAGAAATATCAAGAAAGAGTGTATTGGCACATTCGCAGAATGGTTTTAACCCACGATGATGCAGATGATGTACTCCAAAATACATTTGTAAAAGTTTGGCGCGCACTCGAAAATTTCCGTGCAGAATCACAGTTTTACACTTGGCTTTATCGTATTGCTACCAACGAAGCACTCAACCATATAAATATTAAAAAGAAAAAAGCTGTTATTCCTTTTGAAGGTAACAATAATAGCAGTGATGACGATGATAATAATTTCGGACCTTCAAATTATTTAAAAAGCGACCCATATTTTAACGGTGATGAAATTGAACTAAAACTCCAACAAGCAATTGATACTTTGCCCGATAAACAAAAACAAGTTTTCCTTTTGCGCTACTACGATGAAATGCCTTATGAAGACATGAGCGAAATGTTAGGAACAAGTGTGGGCGCACTTAAAGCCTCTTATCACCATGCCGCACAAAAAGTAGAAGCATTTTTATTAAAACGAGATTAA
PROTEIN sequence
Length: 189
MSDNELLDLFHSGQREKAFTLLMEKYQERVYWHIRRMVLTHDDADDVLQNTFVKVWRALENFRAESQFYTWLYRIATNEALNHINIKKKKAVIPFEGNNNSSDDDDNNFGPSNYLKSDPYFNGDEIELKLQQAIDTLPDKQKQVFLLRYYDEMPYEDMSEMLGTSVGALKASYHHAAQKVEAFLLKRD*