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scnpilot_solids2_trim150_scaffold_26_curated

Search features with annotation key words

Displaying items 31-60 of 197 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_26_curated_31
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27203..27484)
DNA (282bp) protein (94aa)
Phenylacetate-CoA oxygenase, PaaH subunit n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2I8_FLAB3
Phenylacetate-CoA oxygenase {ECO:0000313|EMBL:KEY18463.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
phenylacetate-CoA oxygenase, PaaH subunit; K02610 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
scnpilot_solids2_trim150_scaffold_26_curated_32
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27508..28446)
DNA (939bp) protein (313aa)
paaA; phenylacetate-CoA oxygenase subunit PaaA; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
Phenylacetate-CoA oxygenase, PaaG subunit n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2Q6_FLAB3
ATPase AAA {ECO:0000313|EMBL:KIA84372.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
scnpilot_solids2_trim150_scaffold_26_curated_33
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28485..28742)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CGH0_ELIME
Uncharacterized protein {ECO:0000313|EMBL:CDN73696.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_26_curated_34
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28762..29850)
DNA (1089bp) protein (363aa)
Phenylacetate-CoA oxygenase/reductase, PaaK subunit n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2Q4_FLAB3
phenylacetate-CoA oxygenase/reductase, PaaK subunit; K02613 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
Phenylacetate-CoA oxygenase/reductase, PaaK subunit {ECO:0000313|EMBL:ACU08717.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_26_curated_35
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30122..32713
DNA (2592bp) protein (864aa)
ATP-dependent chaperone protein ClpB n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VU76_9FLAO
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
ClpB protein; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
scnpilot_solids2_trim150_scaffold_26_curated_36
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33127..33987
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5NZP6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ09760.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
scnpilot_solids2_trim150_scaffold_26_curated_37
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34410..35690)
DNA (1281bp) protein (427aa)
dihydrofolate synthase (EC:6.3.2.12 6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
Bifunctional protein FolC n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUV5_9FLAO
Folylpolyglutamate synthase {ECO:0000313|EMBL:KIC61774.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
scnpilot_solids2_trim150_scaffold_26_curated_38
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35746..37095
DNA (1350bp) protein (450aa)
Putative outer membrane efflux protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3D6_FLAB3
outer membrane efflux protein; K12340 outer membrane channel protein
Putative outer membrane efflux protein {ECO:0000313|EMBL:ACU08949.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_26_curated_39
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37149..37736
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3D7_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08950.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_26_curated_40
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37738..38823
DNA (1086bp) protein (362aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3D8_FLAB3
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KFF27623.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
scnpilot_solids2_trim150_scaffold_26_curated_41
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38882..39592
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUV9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF27624.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
scnpilot_solids2_trim150_scaffold_26_curated_42
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39589..40041)
DNA (453bp) protein (151aa)
alkyl hydroperoxide reductase; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Peroxiredoxin n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CMH4_9FLAO
Thiol peroxidase {ECO:0000313|EMBL:KFE99369.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
scnpilot_solids2_trim150_scaffold_26_curated_43
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

40165..40797
DNA (633bp) protein (211aa)
putative EndoIII-related endonuclease; K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
Endonuclease III n=4 Tax=Riemerella anatipestifer RepID=E4TBV6_RIEAD
scnpilot_solids2_trim150_scaffold_26_curated_44
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40787..41140)
DNA (354bp) protein (118aa)
Response Regulator Receiver Signal Transduction Histidine Kinase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZH8_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA84541.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
Response Regulator Receiver Signal transduction Histidine Kinase
scnpilot_solids2_trim150_scaffold_26_curated_45
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41289..43076)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUW4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIC61935.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_26_curated_46
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

43237..43698
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUW5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:BAP29530.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_26_curated_47
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

43775..44470
DNA (696bp) protein (232aa)
MotA/TolQ/ExbB family biopolymer transport prote in n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZI2_FLAB3
Biopolymer transporter ExbB {ECO:0000313|EMBL:KIA89244.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
MotA/TolQ/ExbB family biopolymer transport prote in; K03561 biopolymer transport protein ExbB
scnpilot_solids2_trim150_scaffold_26_curated_48
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

44472..44870
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI00035C636F
Biopolymer transporter ExbD {ECO:0000313|EMBL:KIA89243.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
scnpilot_solids2_trim150_scaffold_26_curated_49
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

44888..45715
DNA (828bp) protein (276aa)
Ferric siderophore transport system, periplasmic binding protein TonB n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZI4_FLAB3
Ferric siderophore ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIA89242.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Ferric siderophore transport system, periplasmic binding protein TonB
scnpilot_solids2_trim150_scaffold_26_curated_50
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45751..46257)
DNA (507bp) protein (169aa)
Zn-finger containing NTP pyrophosphohydrolase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CGV4_9FLAO
NUDIX hydrolase {ECO:0000313|EMBL:KFF28753.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_26_curated_51
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46254..47180)
DNA (927bp) protein (309aa)
Tyrosine recombinase XerC n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZV5_FLAB3
Integrase; K04763 integrase/recombinase XerD
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_26_curated_52
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47203..47625)
DNA (423bp) protein (141aa)
deoxycytidylate deaminase; K01493 dCMP deaminase [EC:3.5.4.12]
Deoxycytidylate deaminase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CGD7_9FLAO
Deoxycytidylate deaminase {ECO:0000313|EMBL:EJL71124.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
scnpilot_solids2_trim150_scaffold_26_curated_53
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47639..48406)
DNA (768bp) protein (256aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWY8_9FLAO
Enoyl-CoA hydratase {ECO:0000313|EMBL:KIC62361.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
enoyl-CoA hydratase/carnithine racemase
scnpilot_solids2_trim150_scaffold_26_curated_54
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48518..49882)
DNA (1365bp) protein (455aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
Catalase (EC:1.11.1.6)
Catalase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWY7_9FLAO
scnpilot_solids2_trim150_scaffold_26_curated_55
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

49974..50942
DNA (969bp) protein (323aa)
Transcriptional regulator, LysR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWY6_9FLAO
LysR family transcriptional regulator {ECO:0000313|EMBL:KFE99307.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
Hydrogen peroxide-inducible genes activator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
scnpilot_solids2_trim150_scaffold_26_curated_56
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

51132..52412
DNA (1281bp) protein (427aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
S-adenosylmethionine synthase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZW0_FLAB3
scnpilot_solids2_trim150_scaffold_26_curated_57
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

52503..52991
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZW1_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA84443.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_26_curated_58
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

53171..53764
DNA (594bp) protein (198aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZW2_FLAB3
RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:ACU06647.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_26_curated_59
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

53804..53938
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2SZN7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL71117.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_26_curated_60
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

53959..54651
DNA (693bp) protein (231aa)
2-haloalkanoic acid dehalogenase (EC:3.8.1.2); K07025 putative hydrolase of the HAD superfamily
2-haloalkanoic acid dehalogenase {ECO:0000313|EMBL:ACU06649.1}; EC=3.8.1.2 {ECO:0000313|EMBL:ACU06649.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
2-haloalkanoic acid dehalogenase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZW4_FLAB3
Displaying items 31-60 of 197 in total

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