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scnpilot_solids2_trim150_scaffold_40_curated

Search features with annotation key words

Displaying items 31-60 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_40_curated_31
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31785..32468)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICQ2_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_32
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32776..33837)
DNA (1062bp) protein (354aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Chorismate synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJC9_FLUTR
scnpilot_solids2_trim150_scaffold_40_curated_33
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33844..34734)
DNA (891bp) protein (297aa)
purine or other phosphorylase family 1; K00757 uridine phosphorylase [EC:2.4.2.3]
Purine or other phosphorylase family 1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG40_FLUTR
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:AEA44675.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_34
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34715..35449)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG41_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44676.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_35
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35466..36761
DNA (1296bp) protein (432aa)
CinA-like protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG42_FLUTR
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_36
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


36833..37069
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG43_FLUTR
50S ribosomal protein L28P; K02902 large subunit ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_37
Prevotella sp. oral taxon 473, Alloprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


37114..37302
DNA (189bp) protein (63aa)
50S ribosomal protein L33 n=1 Tax=Pontibacter roseus RepID=UPI00036A54D3
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1035197 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Alloprevotella.;" source="Prevotella sp. oral taxon 473 str. F0040.;"
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
scnpilot_solids2_trim150_scaffold_40_curated_38
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

37313..37465
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG45_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_39
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37558..38517
DNA (960bp) protein (320aa)
cell division protein FtsY n=1 Tax=Pedobacter agri RepID=UPI00029A3CA6
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor
scnpilot_solids2_trim150_scaffold_40_curated_40
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38579..42316
DNA (3738bp) protein (1246aa)
PKD domain-containing protein n=1 Tax=Flavobacterium sp. F52 RepID=J1AAW3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KJS07289.1}; Flags: Fragment;; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
PKD domain-containing protein
scnpilot_solids2_trim150_scaffold_40_curated_41
unknown

Not on your lists

42388..42594
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_40_curated_42
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42670..44079)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB55_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42138.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_43
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

44093..44893
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB56_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_44
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

44890..45444
DNA (555bp) protein (185aa)
ATP/cobalamin adenosyltransferase (EC:2.5.1.17)
cobalamin adenosyltransferase n=1 Tax=Myroides injenensis RepID=UPI000289EB8C
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_45
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

45474..45920
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIK3_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_46
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

46084..46305
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB60_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42143.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_47
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46335..47393)
DNA (1059bp) protein (353aa)
Glycosyl transferase family 2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBV1_FLUTR
family 2 glycosyl transferase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_48
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(47386..48309)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBV2_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_49
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

48323..48877
DNA (555bp) protein (185aa)
Crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 /
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBV3_FLUTR
scnpilot_solids2_trim150_scaffold_40_curated_50
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48980..49327)
DNA (348bp) protein (116aa)
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_51
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49324..50655)
DNA (1332bp) protein (444aa)
amidohydrolase; K01465 dihydroorotase [EC:3.5.2.3]
Amidohydrolase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y7G2_9SPHI
Amidohydrolase {ECO:0000313|EMBL:EHQ29383.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_solids2_trim150_scaffold_40_curated_52
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(50652..51368)
DNA (717bp) protein (239aa)
Dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
Dolichyl-phosphate beta-D-mannosyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBV7_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_53
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51452..51910)
DNA (459bp) protein (153aa)
Regulatory protein RecX n=1 Tax=Kordia algicida OT-1 RepID=A9DL91_9FLAO
RecX family transcriptional regulator; K03565 regulatory protein
Tax=CG_Flavo_02
scnpilot_solids2_trim150_scaffold_40_curated_54
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51911..52951)
DNA (1041bp) protein (347aa)
riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Riboflavin biosynthesis protein RibD n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAW6_FLUTR
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_55
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

53035..55089
DNA (2055bp) protein (685aa)
OmpA/MotB domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKF8_FLUTR
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEA45084.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_56
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55152..56276)
DNA (1125bp) protein (375aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W187_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF12129.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
RND family efflux transporter MFP subunit
scnpilot_solids2_trim150_scaffold_40_curated_57
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56269..60624)
DNA (4356bp) protein (1452aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CC18_SPHS2
CzcA family heavy metal efflux pump; K07239 heavy-metal exporter, HME family
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ADZ77468.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_40_curated_58
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(60680..61072)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000372DDB2
Strain DSM 12611 Contig13, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51755.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_40_curated_59
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

61189..61884
DNA (696bp) protein (232aa)
DNA repair protein RadC n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENC4_RUNSL
DNA repair protein RadC; K03630 DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:AEI49885.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_40_curated_60
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

61933..63078
DNA (1146bp) protein (382aa)
WecB2; UDP-N-acetylglucosamine 2-epimerase; K13019 UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
UDP-N-acetylglucosamine 2-epimerase id=3886540 bin=GWF2_Bacteroidetes_29_10 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Displaying items 31-60 of 182 in total

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