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scnpilot_solids2_trim150_scaffold_6_curated_54

Organism: solids_Flavobacteriia_1

near complete RP 52 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(57966..58232)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein {ECO:0000313|EMBL:EZH75801.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 83.0
  • Bit_score: 94
  • Evalue 6.20e-17
Cold shock protein, putative DNA-binding protein id=2918160 bin=GWF2_Bacteroidetes_40_14 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 85.0
  • Bit_score: 78
  • Evalue 4.30e-12
cold-shock DNA-binding protein family similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 80.0
  • Bit_score: 76
  • Evalue 3.90e-12

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Taxonomy

Aquimarina atlantica → Aquimarina → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 267
ATGAAAGCGAGAGAAGATATTAAAGCAAAGCACATTGAGATCGGAATACCAAAGCGTGAGAAGGAAGAAATTGATCCTATACTGAGAGGAGTTATCAATTATTTTGATGATACCAAAGGATATGGGTTCATAAAAACCGCTGATGATGAAAATTTCTTTGTCCACCAGAACAACATTTCAGGAGAACCTGCAAAAGGGAAAAAAGTACAATTTGAAAAGGAAAAAGGGGCAAAAGGATGGGCAGCAGTACGTGTGGTAATTGAGTGA
PROTEIN sequence
Length: 89
MKAREDIKAKHIEIGIPKREKEEIDPILRGVINYFDDTKGYGFIKTADDENFFVHQNNISGEPAKGKKVQFEKEKGAKGWAAVRVVIE*