ggKbase home page

scnpilot_solids2_trim150_scaffold_6_curated_95

Organism: solids_Flavobacteriia_1

near complete RP 52 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 94586..95299

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11VK4_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 233.0
  • Bit_score: 392
  • Evalue 3.60e-106
Membrane protein {ECO:0000313|EMBL:KGD67752.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 236.0
  • Bit_score: 400
  • Evalue 1.40e-108
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 233.0
  • Bit_score: 392
  • Evalue 1.10e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium aquatile → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 714
ATGGATGATAAAATGATAACGATTGACAATTATTTAGACAATCATTACATACACAGGAGCAATTGGTTGAGAGCTGCAGTGCTTGGAGCCAATGATGGGATAATTTCTATTTCCAGTTTGGCAATAGGTGTTGCTGCTGCGAGCTCAACAAGAGAACCGATTGTTTTGGCAACAGTTGCAGGATTAGTGGCCGGAGCTTTGTCAATGGCAGCTGGAGAATACGTTTCAGTAAGTTCTCAGACAGATACCGAAAAAGCAGACATCGAACGAGAGAAAAAGGAATTGGCAGAAATGCCCGAAGAAGAACTAAAAATATTAGCACAAATCTATGAGAAGAGAGGACTCGGAAGAGAAACCGCAATGCAAGTAGCAATTGAACTTACTGAAAAAGATGCTTTGGGAACTCATATTCGTGATGAATTGGGTCTTAATGAAATGAGCAAGGCAAATCCTATTCAGGCAGCATTGGCTTCCGGAGCATCATTTACGGTTGGTGGCATTTTGCCACTATTGGTGATACTTTTTTCTCCAGTTGCAGGAATGGAATACTGGCTTTATGGATTTACAATCATATTTTTAATTATCTTGGGAATTGCATCTGCAAAAACCGGAGGTTCGAGTATTTTGAAAGCGATCATTCGGATTACAGTTTGGGGAACAATCGCGATGATCCTTTCTGCATTCGTTGGCTATCTTTTCGGAGTAAATGTTTAG
PROTEIN sequence
Length: 238
MDDKMITIDNYLDNHYIHRSNWLRAAVLGANDGIISISSLAIGVAAASSTREPIVLATVAGLVAGALSMAAGEYVSVSSQTDTEKADIEREKKELAEMPEEELKILAQIYEKRGLGRETAMQVAIELTEKDALGTHIRDELGLNEMSKANPIQAALASGASFTVGGILPLLVILFSPVAGMEYWLYGFTIIFLIILGIASAKTGGSSILKAIIRITVWGTIAMILSAFVGYLFGVNV*