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scnpilot_solids2_trim150_scaffold_99_curated

Search features with annotation key words

Displaying items 121-150 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_99_curated_121
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111585..112313)
DNA (729bp) protein (243aa)
UPI0003CDFFB7 related cluster n=1 Tax=unknown RepID=UPI0003CDFFB7
Flagellar basal body rod protein FlgF {ECO:0000313|EMBL:ESZ15912.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
flgF; flagellar basal body rod protein FlgF; K02391 flagellar basal-body rod protein FlgF
scnpilot_solids2_trim150_scaffold_99_curated_122
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112317..113474)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003618BBA
Uncharacterized protein {ECO:0000313|EMBL:CDX28336.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Protein of unknown function (DUF1217)
scnpilot_solids2_trim150_scaffold_99_curated_123
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113594..114472
DNA (879bp) protein (293aa)
Flagellar motor protein MotA n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNX3_9RHIZ
Flagellar motor protein MotA {ECO:0000313|EMBL:EHK57561.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
flagellar motor protein MotA; K02556 chemotaxis protein MotA
scnpilot_solids2_trim150_scaffold_99_curated_124
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114509..115438
DNA (930bp) protein (310aa)
Flagellar motor switch protein FliM n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEK9_9RHIZ
Flagellar motor switch protein FliM {ECO:0000313|EMBL:EHH09818.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
surface presentation of antigens (SPOA) protein; K02416 flagellar motor switch protein FliM
scnpilot_solids2_trim150_scaffold_99_curated_125
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115455..115850
DNA (396bp) protein (132aa)
Flagellar motor switch protein FliN n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNX5_9RHIZ
Flagellar motor switch protein FliN {ECO:0000313|EMBL:EHK57563.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
flagellar motor switch protein FliN; K02417 flagellar motor switch protein FliN/FliY
scnpilot_solids2_trim150_scaffold_99_curated_126
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115879..116901
DNA (1023bp) protein (341aa)
UPI0003CFF5D8 related cluster n=1 Tax=unknown RepID=UPI0003CFF5D8
Flagellar motor switch protein FliG {ECO:0000313|EMBL:ESZ29113.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
flagellar motor switch protein FliG; K02410 flagellar motor switch protein FliG
scnpilot_solids2_trim150_scaffold_99_curated_127
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116919..118010
DNA (1092bp) protein (364aa)
flagellar biosynthesis protein FlhB n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D533D3
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:EKF18076.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
flagellar biosynthetic protein FlhB; K02401 flagellar biosynthetic protein FlhB
scnpilot_solids2_trim150_scaffold_99_curated_128
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118021..118476
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNX8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57566.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_99_curated_129
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118492..119187)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003616630
LuxR family transcriptional regulator {ECO:0000313|EMBL:EZQ16473.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
LuxR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_99_curated_130
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119201..119824)
DNA (624bp) protein (208aa)
LuxR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00037F265B
Sigma-70, region 4 family protein {ECO:0000313|EMBL:AID32229.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
LuxR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_99_curated_131
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120161..120808
DNA (648bp) protein (216aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=1 Tax=Caulobacter sp. AP07 RepID=J2HKL4_9CAUL
Glutathione S-transferase {ECO:0000313|EMBL:EJL36273.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
scnpilot_solids2_trim150_scaffold_99_curated_132
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120878..121816
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HS87_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56416.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_99_curated_133
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121903..122208
DNA (306bp) protein (102aa)
ATP-dependent Clp protease ClpS n=1 Tax=Hoeflea sp. 108 RepID=UPI0003797BB7
clpS; ATP-dependent Clp protease adaptor
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
scnpilot_solids2_trim150_scaffold_99_curated_134
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122225..122596)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000370BA8F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE27330.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
scnpilot_solids2_trim150_scaffold_99_curated_135
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122593..123378)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VEQ1_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU45195.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
scnpilot_solids2_trim150_scaffold_99_curated_136
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123621..124610)
DNA (990bp) protein (330aa)
putative haloacid dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
Phosphoglycerate dehydrogenase-like oxidoreductase n=2 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VID5_RHILT
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EJC72523.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
scnpilot_solids2_trim150_scaffold_99_curated_137
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125005..126066
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y532_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX23757.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_99_curated_138
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126179..127351
DNA (1173bp) protein (391aa)
oxidoreductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036FDEDD
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EHK58709.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative dehydrogenase
scnpilot_solids2_trim150_scaffold_99_curated_139
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127348..127749
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13KK2_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE35387.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
scnpilot_solids2_trim150_scaffold_99_curated_140
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127746..128681)
DNA (936bp) protein (312aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
Dihydrodipicolinate synthetase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3I9_9RHIZ
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EHK52443.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_99_curated_141
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128703..130139)
DNA (1437bp) protein (479aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
aldehyde dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031DD017
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EIM24986.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
scnpilot_solids2_trim150_scaffold_99_curated_142
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130278..131663)
DNA (1386bp) protein (462aa)
alpha,alpha-trehalose-phosphate synthase (UDP-forming); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045, ECO:0000313|EMBL:ABG62923.1};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase:RU362045}; Trehalose-6-phosphate synthase {ECO:0000256|RuleBase:RU362045}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Trehalose 6-phosphate synthase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11I52_MESSB
scnpilot_solids2_trim150_scaffold_99_curated_143
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131707..132501)
DNA (795bp) protein (265aa)
HAD family hydrolase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12]
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117, ECO:0000313|EMBL:ABG62925.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Trehalose 6-phosphatase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11I50_MESSB
scnpilot_solids2_trim150_scaffold_99_curated_144
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132714..133166
DNA (453bp) protein (151aa)
rbsd or fucu transport; K02431 L-fucose mutarotase [EC:5.1.3.-]
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMI9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58047.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_99_curated_145
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133174..134109
DNA (936bp) protein (312aa)
ribokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BD8AB
Ribokinase {ECO:0000313|EMBL:KJC57071.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
scnpilot_solids2_trim150_scaffold_99_curated_146
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134304..135980
DNA (1677bp) protein (559aa)
UPI0003D02520 related cluster n=1 Tax=unknown RepID=UPI0003D02520
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY96812.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_99_curated_147
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136084..137199
DNA (1116bp) protein (372aa)
UPI0003CDEEE7 related cluster n=1 Tax=unknown RepID=UPI0003CDEEE7
Sugar ABC transporter permease {ECO:0000313|EMBL:KGM32189.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_99_curated_148
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137209..138144
DNA (936bp) protein (312aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7XZZ4_MESOW
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:CDX39413.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
scnpilot_solids2_trim150_scaffold_99_curated_149
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138321..139184)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJA1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59187.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_99_curated_150
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139201..140268
DNA (1068bp) protein (356aa)
Zn-dependent dipeptidase, microsomal dipeptidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTZ6_9RHIZ
Peptidase {ECO:0000313|EMBL:KFG67400.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Zn-dependent dipeptidase, microsomal dipeptidase
Displaying items 121-150 of 151 in total

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