ggKbase home page

scnpilot_solids2_trim150_scaffold_73_curated

Search features with annotation key words

Displaying items 91-120 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_73_curated_91
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92229..92654
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLF5_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58484.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_73_curated_92
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92661..93314
DNA (654bp) protein (218aa)
Methyltransferase protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLF6_9RHIZ
Methyltransferase protein {ECO:0000313|EMBL:EHK58485.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative methyltransferase
scnpilot_solids2_trim150_scaffold_73_curated_93
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93350..94384)
DNA (1035bp) protein (345aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
Aspartate-semialdehyde dehydrogenase n=1 Tax=Nitratireductor indicus C115 RepID=K2NV92_9RHIZ
scnpilot_solids2_trim150_scaffold_73_curated_94
unknown

Not on your lists

comp(94497..94628)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_73_curated_95
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94975..95610
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8THV3_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV10098.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_73_curated_96
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95683..96795)
DNA (1113bp) protein (371aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UPI0003D00954 related cluster n=1 Tax=unknown RepID=UPI0003D00954
3-isopropylmalate dehydrogenase
scnpilot_solids2_trim150_scaffold_73_curated_97
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96900..97283)
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL10_9RHIZ
Endoribonuclease L-PSP {ECO:0000313|EMBL:EHK58593.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
endoribonuclease L-PSP
scnpilot_solids2_trim150_scaffold_73_curated_98
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97297..97902)
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL11_9RHIZ
scnpilot_solids2_trim150_scaffold_73_curated_99
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97990..99246)
DNA (1257bp) protein (419aa)
UPI0003CFDB56 related cluster n=1 Tax=unknown RepID=UPI0003CFDB56
Membrane protein {ECO:0000313|EMBL:ESZ36653.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_73_curated_100
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99367..100320)
DNA (954bp) protein (318aa)
Inner-membrane translocator n=1 Tax=Geobacter sp. (strain M18) RepID=E8WJL2_GEOS8
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
scnpilot_solids2_trim150_scaffold_73_curated_101
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100317..101210)
DNA (894bp) protein (298aa)
ABC transporter permease n=1 Tax=Janthinobacterium lividum RepID=UPI000287DA89
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Tax=BJP_IG2102_Desulfovibrionales_64_25
scnpilot_solids2_trim150_scaffold_73_curated_102
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(101207..101938)
DNA (732bp) protein (244aa)
ABC transporter related protein n=6 Tax=Pelosinus fermentans RepID=I8RHV9_9FIRM id=5223256 bin=16ft_combo_ws3_JS1 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
scnpilot_solids2_trim150_scaffold_73_curated_103
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101931..102704)
DNA (774bp) protein (258aa)
ABC transporter related n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEI8_METS4
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
Tax=RBG_16_Deltaproteobacteria_64_85_curated
scnpilot_solids2_trim150_scaffold_73_curated_104
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102701..103867)
DNA (1167bp) protein (389aa)
Extracellular ligand-binding receptor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE58_XANP2
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ABS66301.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids2_trim150_scaffold_73_curated_105
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104623..105345
DNA (723bp) protein (241aa)
4-carboxy-4-hydroxy-2-oxoadipate aldolase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VSW3_9SPHN
4-carboxy-4-hydroxy-2-oxoadipate aldolase {ECO:0000313|EMBL:EZP79650.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase
scnpilot_solids2_trim150_scaffold_73_curated_106
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105345..105845
DNA (501bp) protein (167aa)
Putative HPA reductase {ECO:0000313|EMBL:EPX76625.1}; EC=1.14.14.9 {ECO:0000313|EMBL:EPX76625.1};; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
Putative HPA reductase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9REU3_9RHOB
flavin reductase
scnpilot_solids2_trim150_scaffold_73_curated_107
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105869..106846)
DNA (978bp) protein (326aa)
Conserved protein of DIM6/NTAB family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HZI5_9BRAD
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:EJN10621.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_73_curated_108
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106884..107840)
DNA (957bp) protein (319aa)
Transcriptional regulator n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VWJ4_9BRAD
Transcriptional regulator {ECO:0000313|EMBL:EJN10622.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
LysR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_73_curated_109
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107998..108834)
DNA (837bp) protein (279aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HZT7_9BRAD
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:EJN10623.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
amidohydrolase 2
scnpilot_solids2_trim150_scaffold_73_curated_110
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108866..110173)
DNA (1308bp) protein (436aa)
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CQM6_9BRAD
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family {ECO:0000313|EMBL:EJN10624.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
thermophilic desulfurizing enzyme
scnpilot_solids2_trim150_scaffold_73_curated_111
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110176..111456)
DNA (1281bp) protein (427aa)
(S)-2-hydroxy-acid oxidase (EC:1.1.3.15); K15054 (S)-mandelate dehydrogenase [EC:1.1.99.31]
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WD89_9BRAD
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase {ECO:0000313|EMBL:EJN10625.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
scnpilot_solids2_trim150_scaffold_73_curated_112
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111610..112614)
DNA (1005bp) protein (335aa)
NAD(P)H quinone oxidoreductase, PIG3 family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM37_9RHIZ
NAD(P)H quinone oxidoreductase, PIG3 family protein {ECO:0000313|EMBL:EHK58229.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NAD(P)H quinone oxidoreductase
scnpilot_solids2_trim150_scaffold_73_curated_113
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112738..112932
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKS1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX34477.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_73_curated_114
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113022..114302
DNA (1281bp) protein (427aa)
MFS transporter n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FA2789
Transmembrane transport protein {ECO:0000313|EMBL:CDX34811.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
major facilitator superfamily protein
scnpilot_solids2_trim150_scaffold_73_curated_115
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114346..115842)
DNA (1497bp) protein (499aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IML5_AZOC5
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EXL10503.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
scnpilot_solids2_trim150_scaffold_73_curated_116
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116002..116883
DNA (882bp) protein (294aa)
Transcriptional regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3Q2_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:CCV10901.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_73_curated_117
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116892..118691)
DNA (1800bp) protein (600aa)
Cl-channel voltage-gated family protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y290_9RHIZ
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:EHH14073.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
chloride channel protein; K03281 chloride channel protein, CIC family
scnpilot_solids2_trim150_scaffold_73_curated_118
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118968..119615)
DNA (648bp) protein (216aa)
glutathione transferase zeta 1 (EC:5.2.1.2); K01800 maleylacetoacetate isomerase [EC:5.2.1.2]
Putative glutathione-S-transferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTE0_9PROT
Putative glutathione-S-transferase {ECO:0000313|EMBL:EDP64085.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
scnpilot_solids2_trim150_scaffold_73_curated_119
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119628..120329)
DNA (702bp) protein (234aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FCA1_9RHIZ
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:EHS49601.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
fumarylacetoacetate (FAA) hydrolase
scnpilot_solids2_trim150_scaffold_73_curated_120
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120711..122261
DNA (1551bp) protein (517aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
UPI0003CFBD5D related cluster n=1 Tax=unknown RepID=UPI0003CFBD5D
Displaying items 91-120 of 163 in total

View Taxonomy