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scnpilot_solids2_trim150_scaffold_307_curated

Search features with annotation key words

Displaying items 31-48 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_307_curated_31
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36925..37434)
DNA (510bp) protein (170aa)
methionine-R-sulfoxide reductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Methionine-R-sulfoxide reductase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11LE2_MESSB
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:ABG61783.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_307_curated_32
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37713..38276)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDD6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX53335.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_307_curated_33
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38382..39113)
DNA (732bp) protein (244aa)
UPI0003CF9842 related cluster n=1 Tax=unknown RepID=UPI0003CF9842
Anti-sigma K factor RskA {ECO:0000313|EMBL:ESY68111.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
Anti-sigma K factor RskA
scnpilot_solids2_trim150_scaffold_307_curated_34
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39110..39649)
DNA (540bp) protein (180aa)
UPI0003CE3EF3 related cluster n=1 Tax=unknown RepID=UPI0003CE3EF3
RNA polymerase sigma factor {ECO:0000313|EMBL:ESY68112.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids2_trim150_scaffold_307_curated_35
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39721..39957)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4E9_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89812.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_307_curated_36
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40012..40791)
DNA (780bp) protein (260aa)
Periplasmic binding protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9S7L8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEO56484.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica DSM 10166.;"
substrate-binding protein; K02016 iron complex transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_307_curated_37
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40803..41675)
DNA (873bp) protein (291aa)
Aldose 1-epimerase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RN06_9PROT
Aldose 1-epimerase {ECO:0000313|EMBL:EFH11306.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
aldose 1-epimerase
scnpilot_solids2_trim150_scaffold_307_curated_38
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41753..42430)
DNA (678bp) protein (226aa)
Regulatory protein GntR, HTH:GntR, C-terminal n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V736_9RHOB
Regulatory protein GntR, HTH:GntR, C-terminal {ECO:0000313|EMBL:EAQ06052.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensis SKA53.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_307_curated_39
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42577..43572
DNA (996bp) protein (332aa)
TRAP transporter solute receptor n=1 Tax=Rhodovulum sp. PH10 RepID=J6IWW5_9RHOB
extracellular solute-binding protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
scnpilot_solids2_trim150_scaffold_307_curated_40
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43822..44373
DNA (552bp) protein (184aa)
TRAP dicarboxylate transporter, DctQ subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J6L8K7_9RHOB
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
scnpilot_solids2_trim150_scaffold_307_curated_41
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44370..45686
DNA (1317bp) protein (439aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6B5_9BRAD
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EFI51862.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
dctM2; TRAP dicarboxylate transporter subunit DctM
scnpilot_solids2_trim150_scaffold_307_curated_42
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45683..47017
DNA (1335bp) protein (445aa)
hypothetical protein; K01578 malonyl-CoA decarboxylase [EC:4.1.1.9]
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WYH2_RHOS5
Putative decarboxylase {ECO:0000313|EMBL:CDX51610.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
scnpilot_solids2_trim150_scaffold_307_curated_43
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47010..48527
DNA (1518bp) protein (506aa)
Long-chain-fatty-acid--CoA ligase, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LKU7_RUEPO
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:KGM87893.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DSM 17069.;"
malonyl-CoA synthase
scnpilot_solids2_trim150_scaffold_307_curated_44
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48645..48992
DNA (348bp) protein (116aa)
Endoribonuclease L-PSP n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J5J3_POLGS
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADZ72363.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_307_curated_45
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49004..49939
DNA (936bp) protein (312aa)
ornithine cyclodeaminase/mu-crystallin; K01750 ornithine cyclodeaminase [EC:4.3.1.12]
ornithine cyclodeaminase n=1 Tax=Paracoccus sp. N5 RepID=UPI0003762804
Ornithine cyclodeaminase {ECO:0000313|EMBL:KFF49402.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
scnpilot_solids2_trim150_scaffold_307_curated_46
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49967..50995
DNA (1029bp) protein (343aa)
acetylpolyamine aminohydrolase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F619E1
Acetylpolyamine aminohydrolase {ECO:0000313|EMBL:CDX27440.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
histone deacetylase superfamily protein
scnpilot_solids2_trim150_scaffold_307_curated_47
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51058..52884
DNA (1827bp) protein (609aa)
ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ABD88529.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABD88529.1};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
ATP-dependent DNA helicase RecQ n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213A7_RHOPB
scnpilot_solids2_trim150_scaffold_307_curated_48
uncultured Sphingomonadales bacterium HF0500_24B12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52944..53690
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=uncultured Sphingomonadales bacterium HF0500_24B12 RepID=E0XYI3_9SPHN
Putative uncharacterized protein {ECO:0000313|EMBL:ADI19474.1}; TaxID=710993 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; environmental samples.;" source="uncultured Sphingomonadales bacterium HF0500_24B12.;"
hypothetical protein
Displaying items 31-48 of 48 in total

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