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scnpilot_solids2_trim150_scaffold_145_curated

Search features with annotation key words

Displaying items 31-60 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_145_curated_31
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33298..34503)
DNA (1206bp) protein (402aa)
NnrS n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YLR4_9RHIZ
NnrS {ECO:0000313|EMBL:EHH02542.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
NnrS; K07234 uncharacterized protein involved in response to NO
scnpilot_solids2_trim150_scaffold_145_curated_32
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34547..35044)
DNA (498bp) protein (166aa)
SEC-independent protein translocase protein TatC n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MW9_MESSB
SEC-independent protein translocase protein TatC; K06886 hemoglobin
SEC-independent protein translocase protein TatC {ECO:0000313|EMBL:ABG61250.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_145_curated_33
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35143..35445
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B36230
Uncharacterized protein {ECO:0000313|EMBL:AJD45189.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_145_curated_34
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35464..35997)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0AYQ3_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56269.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_145_curated_35
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36017..36445)
DNA (429bp) protein (143aa)
transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI0003782FF9
DNA-binding transcriptional regulator {ECO:0000313|EMBL:CDX53611.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
scnpilot_solids2_trim150_scaffold_145_curated_36
unknown

Not on your lists

36680..36829
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_145_curated_37
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36908..37264
DNA (357bp) protein (119aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Alkylhydroperoxidase AhpD core n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFU5_NITHX
alkylhydroperoxidase AhpD core
scnpilot_solids2_trim150_scaffold_145_curated_38
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37274..37846)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 141 RepID=UPI00037F99C7
Uncharacterized protein {ECO:0000313|EMBL:GAO38858.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_145_curated_39
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38062..39174
DNA (1113bp) protein (371aa)
class I and II aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Aminotransferase class I and II n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMK5_MESCW
Aminotransferase class I and II {ECO:0000313|EMBL:ADV13950.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_145_curated_40
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39228..40151)
DNA (924bp) protein (308aa)
Putative N-acetyltransferase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNR9_RHISN
N-acetyltransferase
Putative N-acetyltransferase {ECO:0000313|EMBL:ACP21727.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
scnpilot_solids2_trim150_scaffold_145_curated_41
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40432..41505
DNA (1074bp) protein (358aa)
Diguanylate cyclase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y983_9RHIZ
Diguanylate cyclase {ECO:0000313|EMBL:EHH11701.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K13590 diguanylate cyclase
scnpilot_solids2_trim150_scaffold_145_curated_42
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41766..42050)
DNA (285bp) protein (95aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7]
Acylphosphatase n=1 Tax=Rhizobium sp. CF080 RepID=J2IQG2_9RHIZ
scnpilot_solids2_trim150_scaffold_145_curated_43
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42200..42829
DNA (630bp) protein (210aa)
TetR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0L6_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:EHK53483.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_145_curated_44
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42822..43985
DNA (1164bp) protein (388aa)
isovaleryl-CoA dehydrogenase; K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
Isovaleryl-CoA dehydrogenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MI76_9RHIZ
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:EKF20420.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
scnpilot_solids2_trim150_scaffold_145_curated_45
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44061..44444
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0L4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53481.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
AbrB family transcriptional regulator
scnpilot_solids2_trim150_scaffold_145_curated_46
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44441..44824
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DC27_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EDQ32345.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
PilT protein-like protein
scnpilot_solids2_trim150_scaffold_145_curated_47
Mesorhizobium sp. LNJC395A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44864..46471
DNA (1608bp) protein (536aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4); K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
UPI0003CF2594 related cluster n=1 Tax=unknown RepID=UPI0003CF2594
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:ESY15493.1}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
scnpilot_solids2_trim150_scaffold_145_curated_48
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46474..47370
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IPC2_AZOC5
hypothetical protein; K07454 putative restriction endonuclease
Uncharacterized protein {ECO:0000313|EMBL:BAF89855.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_145_curated_49
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47396..48202
DNA (807bp) protein (269aa)
Putative hydrolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSE9_RHITR
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:AGB74152.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
scnpilot_solids2_trim150_scaffold_145_curated_50
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48315..48698
DNA (384bp) protein (128aa)
DGPFAETKE family protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UQG2_9RHIZ
DGPFAETKE family protein {ECO:0000313|EMBL:ENN83970.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_145_curated_51
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48844..49749
DNA (906bp) protein (302aa)
signal protein PDZ n=1 Tax=Rhizobium leguminosarum RepID=UPI0003661980
Signal protein PDZ {ECO:0000313|EMBL:AHF83164.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
serine protease
scnpilot_solids2_trim150_scaffold_145_curated_52
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49768..50397)
DNA (630bp) protein (210aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K630_RHIEC
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ABC91706.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
scnpilot_solids2_trim150_scaffold_145_curated_53
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50553..51194
DNA (642bp) protein (214aa)
Conserved hypothetical glutathione S-transferase like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11II4_MESSB
glutathione S-transferase
Conserved hypothetical glutathione S-transferase like protein {ECO:0000313|EMBL:ABG62791.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_145_curated_54
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51223..51816
DNA (594bp) protein (198aa)
Appr-1-p processing n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JV5_MESSB
Appr-1-p processing
Appr-1-p processing {ECO:0000313|EMBL:ABG62320.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_145_curated_55
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51860..53818
DNA (1959bp) protein (653aa)
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial {ECO:0000313|EMBL:CDX18917.1}; EC=6.4.1.4 {ECO:0000313|EMBL:CDX18917.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
carbamoyl-phosphate synthase L chain ATP-binding protein (EC:6.4.1.4); K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
UPI0003CE2B47 related cluster n=1 Tax=unknown RepID=UPI0003CE2B47
scnpilot_solids2_trim150_scaffold_145_curated_56
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53977..54243)
DNA (267bp) protein (89aa)
Sel1 domain-containing protein repeat-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0K2_9RHIZ
Sel1 domain-containing protein repeat-containing protein {ECO:0000313|EMBL:EHK53469.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Sel1 repeat protein
scnpilot_solids2_trim150_scaffold_145_curated_57
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54697..54876
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2MZL5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF40673.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
scnpilot_solids2_trim150_scaffold_145_curated_58
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54939..56435
DNA (1497bp) protein (499aa)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
AMP nucleosidase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KP68_MESAW
AMP nucleosidase
scnpilot_solids2_trim150_scaffold_145_curated_59
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56439..57491
DNA (1053bp) protein (351aa)
UPI0003D01603 related cluster n=1 Tax=unknown RepID=UPI0003D01603
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ESZ24146.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
endonuclease/exonuclease/phosphatase
scnpilot_solids2_trim150_scaffold_145_curated_60
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57639..58106)
DNA (468bp) protein (156aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
rnhA; ribonuclease H; K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=RNH_MESSB
Displaying items 31-60 of 109 in total

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