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scnpilot_solids2_trim150_scaffold_5_curated

Search features with annotation key words

Displaying items 91-120 of 349 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5_curated_91
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100136..101233
DNA (1098bp) protein (366aa)
UPI0003CE81BB related cluster n=1 Tax=unknown RepID=UPI0003CE81BB
LacI family transcriptional regulator {ECO:0000313|EMBL:ESY74161.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
LacI family transcriptional regulator
scnpilot_solids2_trim150_scaffold_5_curated_92
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101234..101848)
DNA (615bp) protein (205aa)
transporter n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E0F3EA
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13170.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
lysine exporter protein LysE/YggA
scnpilot_solids2_trim150_scaffold_5_curated_93
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101860..102765)
DNA (906bp) protein (302aa)
PfkB domain-containing protein; K00852 ribokinase [EC:2.7.1.15]
UPI0003CE19C5 related cluster n=1 Tax=unknown RepID=UPI0003CE19C5
Ribokinase {ECO:0000313|EMBL:ESY07874.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
scnpilot_solids2_trim150_scaffold_5_curated_94
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102835..103716)
DNA (882bp) protein (294aa)
DNA-O6-methylguanine--protein-cysteine S-methyltransferase / transcriptional regulator Ada; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
6-O-methylguanine-DNA methyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031B42EA
6-O-methylguanine-DNA methyltransferase {ECO:0000313|EMBL:ESX80134.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
scnpilot_solids2_trim150_scaffold_5_curated_95
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103823..104308)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4S7_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13162.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_96
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104330..105076
DNA (747bp) protein (249aa)
endonuclease III; K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
Endonuclease III n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WVA3_OCHA4
scnpilot_solids2_trim150_scaffold_5_curated_97
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105073..105780)
DNA (708bp) protein (236aa)
CysZ-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKK1_9RHIZ
CysZ-like protein {ECO:0000313|EMBL:EHK58699.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
CysZ-like protein; K06203 CysZ protein
scnpilot_solids2_trim150_scaffold_5_curated_98
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105959..106414)
DNA (456bp) protein (152aa)
UPI0003CEAFE8 related cluster n=1 Tax=unknown RepID=UPI0003CEAFE8
MarR family transcriptional regulator {ECO:0000313|EMBL:ESY68145.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
MarR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_5_curated_99
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106411..106995)
DNA (585bp) protein (195aa)
UPI0003CF0873 related cluster n=1 Tax=unknown RepID=UPI0003CF0873
Uncharacterized protein {ECO:0000313|EMBL:ESY83880.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_100
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106988..108055)
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAB3_9RHIZ
ApbE family lipoprotein {ECO:0000313|EMBL:CDX27054.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_101
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108052..109590)
DNA (1539bp) protein (513aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAB4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX27057.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_102
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109587..109808)
DNA (222bp) protein (74aa)
Nitrate reductase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FMQ2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX50685.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
scnpilot_solids2_trim150_scaffold_5_curated_103
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109805..112780)
DNA (2976bp) protein (992aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F1N4_9RHIZ
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:CCV10098.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
scnpilot_solids2_trim150_scaffold_5_curated_104
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112777..113637)
DNA (861bp) protein (287aa)
UPI0003D05B48 related cluster n=1 Tax=unknown RepID=UPI0003D05B48
Xanthine dehydrogenase {ECO:0000313|EMBL:ESZ27210.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
monoxide dehydrogenase
scnpilot_solids2_trim150_scaffold_5_curated_105
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113769..114365
DNA (597bp) protein (199aa)
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
Isochorismatase hydrolase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11DE6_MESSB
Isochorismatase hydrolase {ECO:0000313|EMBL:ABG64579.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_5_curated_106
unknown

Not on your lists

comp(114368..114583)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5_curated_107
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114752..115333
DNA (582bp) protein (194aa)
Conserved hypothetical membrane protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YES7_MOBAS
Conserved hypothetical membrane protein {ECO:0000313|EMBL:EAS48818.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
conserved membrane hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_108
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115343..116458)
DNA (1116bp) protein (372aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
mtnA; methylthioribose-1-phosphate isomerase (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
methylthioribose-1-phosphate isomerase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035E59B8
scnpilot_solids2_trim150_scaffold_5_curated_109
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116455..117723)
DNA (1269bp) protein (423aa)
Methylthioribose kinase {ECO:0000256|HAMAP-Rule:MF_01683}; Short=MTR kinase {ECO:0000256|HAMAP-Rule:MF_01683};; EC=2.7.1.100 {ECO:0000256|HAMAP-Rule:MF_01683};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
5-methylthioribose kinase (EC:2.7.1.100); K00899 5-methylthioribose kinase [EC:2.7.1.100]
Methylthioribose kinase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7L3_9RHIZ
scnpilot_solids2_trim150_scaffold_5_curated_110
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117954..120005)
DNA (2052bp) protein (684aa)
Short chain dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRR7_9RHIZ
Short chain dehydrogenase {ECO:0000313|EMBL:EHK56580.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
class II aldolase/adducin family protein
scnpilot_solids2_trim150_scaffold_5_curated_111
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120104..120640)
DNA (537bp) protein (179aa)
Isochorismatase hydrolase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M088_METRJ
Isochorismatase {ECO:0000313|EMBL:KGJ08953.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
isochorismatase hydrolase
scnpilot_solids2_trim150_scaffold_5_curated_112
unknown

Not on your lists

120736..121320
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5_curated_113
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121384..122940
DNA (1557bp) protein (519aa)
gamma-aminobutyrate metabolism dehydratase/isomerase (EC:4.2.1.- 5.3.3.3); K00483 4-hydroxyphenylacetate-3-monooxygenase large chain [EC:1.14.14.9]
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ98_AFIFE
4-hydroxyphenylacetate 3-hydroxylase {ECO:0000313|EMBL:KFG70576.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
scnpilot_solids2_trim150_scaffold_5_curated_114
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122969..123640
DNA (672bp) protein (224aa)
DSBA oxidoreductase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CW41_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGF70334.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
DSBA oxidoreductase
scnpilot_solids2_trim150_scaffold_5_curated_115
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123669..124358)
DNA (690bp) protein (230aa)
UPI0003CEE880 related cluster n=1 Tax=unknown RepID=UPI0003CEE880
Glycerol metabolism activator {ECO:0000313|EMBL:CDX12409.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
response regulator receiver
scnpilot_solids2_trim150_scaffold_5_curated_116
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124441..125268)
DNA (828bp) protein (276aa)
oxidoreductase FAD/NAD(P)-binding protein; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
Oxidoreductase FAD/NAD(P)-binding protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CP0_MESSB
Oxidoreductase FAD/NAD(P)-binding protein {ECO:0000313|EMBL:EIM72381.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
scnpilot_solids2_trim150_scaffold_5_curated_117
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125460..127538
DNA (2079bp) protein (693aa)
5-oxoprolinase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ52_9RHIZ
5-oxoprolinase {ECO:0000313|EMBL:EHK59244.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
N-methylhydantoinase A/acetone carboxylase, beta subunit
scnpilot_solids2_trim150_scaffold_5_curated_118
Brucella abortus, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127560..127793)
DNA (234bp) protein (78aa)
plasmid stabilization protein ParE n=1 Tax=Rhizobium mongolense RepID=UPI0003B6C9AD
plasmid stabilization system protein
Uncharacterized protein {ECO:0000313|EMBL:AAX73826.1}; TaxID=262698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella abortus biovar 1 (strain 9-941).;"
scnpilot_solids2_trim150_scaffold_5_curated_119
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127883..128152)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JFX4_AGRRK
Strain MEJ076 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ01932.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_120
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128222..130021
DNA (1800bp) protein (600aa)
5-oxoprolinase (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14]
N-methylhydantoinase B n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EIA4_9RHIZ
N-methylhydantoinase B {ECO:0000313|EMBL:CCV04000.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Displaying items 91-120 of 349 in total

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