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scnpilot_solids2_trim150_scaffold_161_curated

Search features with annotation key words

Displaying items 61-82 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_161_curated_61
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(67554..68447)
DNA (894bp) protein (298aa)
Binding-protein-dependent transporter inner membrane component n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y500_9RHIZ
Binding-protein-dependent transporter inner membrane component {ECO:0000313|EMBL:EHH13235.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
binding-protein-dependent transporter inner membrane component; K02025 multiple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_161_curated_62
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68783..70039)
DNA (1257bp) protein (419aa)
Extracellular solute-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y501_9RHIZ
Extracellular solute-binding protein {ECO:0000313|EMBL:EHH13236.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
ABC-type sugar transport system, periplasmic component
scnpilot_solids2_trim150_scaffold_161_curated_63
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70434..71444
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F8F1D
Transcription regulator {ECO:0000313|EMBL:EHK58722.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_161_curated_64
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71589..73001)
DNA (1413bp) protein (471aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485};; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
6-phosphogluconate dehydrogenase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FAT1_9RHIZ
6-phosphogluconate dehydrogenase, decarboxylating
scnpilot_solids2_trim150_scaffold_161_curated_65
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(73501..73761)
DNA (261bp) protein (87aa)
carbon-monoxide dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000360995D
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein {ECO:0000313|EMBL:AGB46087.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_161_curated_66
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(74406..76760)
DNA (2355bp) protein (785aa)
carbon-monoxide dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003614ED4
Carbon-monoxide dehydrogenase {ECO:0000313|EMBL:ESY76122.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
scnpilot_solids2_trim150_scaffold_161_curated_67
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(76888..77388)
DNA (501bp) protein (167aa)
carbon-monoxide dehydrogenase small subunit; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Carbon-monoxide dehydrogenase small subunit n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98L90_RHILO
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:BAB48573.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_161_curated_68
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77630..78817
DNA (1188bp) protein (396aa)
UPI0003CEFAC0 related cluster n=1 Tax=unknown RepID=UPI0003CEFAC0
Uncharacterized protein {ECO:0000313|EMBL:ESY70937.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_161_curated_69
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78826..80166
DNA (1341bp) protein (447aa)
ATPase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EA81B2
signal transduction histidine kinase
ATPase {ECO:0000313|EMBL:ESY97432.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
scnpilot_solids2_trim150_scaffold_161_curated_70
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80498..81400)
DNA (903bp) protein (301aa)
UPI0003CEEAB8 related cluster n=1 Tax=unknown RepID=UPI0003CEEAB8
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:ESX52752.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_161_curated_71
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81624..82814
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037661A7
Transporter {ECO:0000313|EMBL:KJC59111.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
major facilitator superfamily MFS_1
scnpilot_solids2_trim150_scaffold_161_curated_72
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82830..84557)
DNA (1728bp) protein (576aa)
SulP family sulfate transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003780036
Sulfate transporter family protein {ECO:0000313|EMBL:EHK58868.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
sulfate transporter; K03321 sulfate permease, SulP family
scnpilot_solids2_trim150_scaffold_161_curated_73
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84634..84900)
DNA (267bp) protein (89aa)
XRE family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FK21_9RHIZ
XRE family transcriptional regulator {ECO:0000313|EMBL:ESX80400.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
helix-turn-helix domain-containing protein
scnpilot_solids2_trim150_scaffold_161_curated_74
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85606..86016
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K0A3_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM38301.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
scnpilot_solids2_trim150_scaffold_161_curated_75
unknown

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86154..86441
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_161_curated_76
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86452..88125)
DNA (1674bp) protein (558aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49]
Urocanate hydratase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FN98_9RHIZ
scnpilot_solids2_trim150_scaffold_161_curated_77
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88122..88928)
DNA (807bp) protein (269aa)
N-formylglutamate amidohydrolase; K01479 formiminoglutamase [EC:3.5.3.8]
N-formylglutamate amidohydrolase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N3N3_9RHIZ
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:EKF18883.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
scnpilot_solids2_trim150_scaffold_161_curated_78
unknown

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comp(88925..89113)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_161_curated_79
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89113..90648)
DNA (1536bp) protein (512aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hutHa1; histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3]
Histidine ammonia-lyase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LM78_9RHIZ
scnpilot_solids2_trim150_scaffold_161_curated_80
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90833..92032)
DNA (1200bp) protein (400aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hutI; imidazolonepropionase HutI (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C725_9RHIZ
scnpilot_solids2_trim150_scaffold_161_curated_81
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92108..93475
DNA (1368bp) protein (456aa)
N-formimino-L-glutamate deiminase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C726_9RHIZ
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:EIM77628.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
N-formimino-L-glutamate deiminase
scnpilot_solids2_trim150_scaffold_161_curated_82
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93472..94101
DNA (630bp) protein (210aa)
Histidine utilization repressor n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C727_9RHIZ
Histidine utilization repressor {ECO:0000313|EMBL:EIM77629.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hutC; histidine utilization repressor; K05836 GntR family transcriptional regulator, histidine utilization repressor
Displaying items 61-82 of 82 in total

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