ggKbase home page

scnpilot_solids2_trim150_scaffold_145_curated_105

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 97935..98144

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380A540 similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 69.0
  • Bit_score: 110
  • Evalue 8.00e-22
Cold-shock protein {ECO:0000313|EMBL:EXL09899.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 69.0
  • Bit_score: 126
  • Evalue 1.20e-26
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 69.0
  • Bit_score: 107
  • Evalue 1.60e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGAATACTGGAACAGTCAAGTTCTTCAATACGACCAAAGGTTTTGGCTTCATCGAGCTTGGCAACGGCCAGCCCGACGTTTTCGTCCACATCTCGGCCGTCGAGCGCTCGGGAATGCAGTCACTGGTCGAAGGCCAGAAGGTCAGCTTCGACATCGTGAAGGACGCCCGGAACGGCAAGAGCGCCGCCGAGAACCTTAAGGCCGCCTAA
PROTEIN sequence
Length: 70
MNTGTVKFFNTTKGFGFIELGNGQPDVFVHISAVERSGMQSLVEGQKVSFDIVKDARNGKSAAENLKAA*