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scnpilot_solids2_trim150_scaffold_1754_curated_3

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(3234..4649)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HCK9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 462.0
  • Bit_score: 566
  • Evalue 2.70e-158
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ERF82206.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 462.0
  • Bit_score: 566
  • Evalue 3.80e-158
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 473.0
  • Bit_score: 547
  • Evalue 3.20e-153

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGAGCCCGATCTCTCGGGGCTTCGTCGTCTCCGTTGCCGTTATGGCGGCGGGGATCGGCGGGTTTGCGGCCGGACGGCCGGACCTGTGGCCAACCTCTTTGACAAGGACGAGCGCCGCCATGCCTGCGGCCACGCAGTCGCCGGGGCGGGTGATCTATTACCAGGACCCGGATGGCAAGCCTTCCTACTCGGCAACGCCTGTGAAGACACCGGACGGCCGCGCCTACAGTCCGGTGCCGGAGAGCGCGGAGATGAGTTTCGAGGATTCCGAACCGTCGCCTTCCGTCACCGCGCAACCGGAGCGCAAGATCAAATACTACCGCAATCCGATGGGTTTGCCGGACACCTCGCCGACCCCGAAGAAGGATTCGATGGGCATGGATTACCTGCCCGTTTACGAGGGCGAGGACAGCGACGACGGCAGCGTCAAGATCAGCCCCGTTAGGATCCAGAAGACCGGCGTGCGTTCGGAACCGGTGGAACGCGGGTCGCTGAGCATGCCGCTGCGTGCTCCCGGAACGATCCAGCTCGACGAGCGCCTCATCTCGGTCGTGGCGTTGCGTTTCGAAGCTTTCATCGAATCGGTCGCGAATGTCACCACGGGGTCGGTGGTCCGGAAGGGTCAGCCGTTGATGAAGGTCTACGGCCCGGCCCTGTCGAGCGCGGCGGCTGAATATCTCTCGGCGTTGCGGTCGGCGGCGGGTGGCGAACTTGGCAGCCAGGCGATGAAGGGGGCAAGGCGCCGCCTCGACAATCTCGGCATGCCGGAGGGCGTTATCGAGACGATCGAGAAAACGCGCGACCTGCCGATCGCCGTCACCTGGCCCGCACCACAAGATGGCGTCGTGCTGGAACGCGCGGCCGTCAACGGCATGAGGGCGGCGCCCGGCGACGTCATGTTCCGCATCGCCGATACGTCCGTGGTCTGGGCGCTCATCGACATCTCCGAACGCGACCTCGCTCGTGTCAGGCTCGGCCAGAGTGTCACGCTGACTCCGCGCGGCATGCCGGGCACGACATTCACGGGCAAGGTCTCGTTGATCTACCCGCAAATCAACAAGGAGACCCGTACCGGACGGGTGCGGGTCGAACTCGACAACCATGACGGCGTGCTGCTGCCCGACATGTATGTCGATGCGAGGATCGCCACCGGCTCCGATACCCCGGTCCTGACGGTGCCGGAGAGCGCGGTGATCGACAGCGGCGAGCGACAGGTCGTGCTGCTCGACAAGGGAGACGGCCGTTTCGAGCCCCGCCAGGTCAAGCTCGGCCAGCGCGGCGCCGGGCGCACGGAAATCCGCGAGGGGGTCTCCGAAGGCGACAAGGTCGTGGTGTCCGCCAATTTCCTGATTGATGCCGAGAGCAACCTGAAAGCCGCGCTCCAGGGCCTGACCGCGCTGGGAGATGCCAAATGA
PROTEIN sequence
Length: 472
MSPISRGFVVSVAVMAAGIGGFAAGRPDLWPTSLTRTSAAMPAATQSPGRVIYYQDPDGKPSYSATPVKTPDGRAYSPVPESAEMSFEDSEPSPSVTAQPERKIKYYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEDSDDGSVKISPVRIQKTGVRSEPVERGSLSMPLRAPGTIQLDERLISVVALRFEAFIESVANVTTGSVVRKGQPLMKVYGPALSSAAAEYLSALRSAAGGELGSQAMKGARRRLDNLGMPEGVIETIEKTRDLPIAVTWPAPQDGVVLERAAVNGMRAAPGDVMFRIADTSVVWALIDISERDLARVRLGQSVTLTPRGMPGTTFTGKVSLIYPQINKETRTGRVRVELDNHDGVLLPDMYVDARIATGSDTPVLTVPESAVIDSGERQVVLLDKGDGRFEPRQVKLGQRGAGRTEIREGVSEGDKVVVSANFLIDAESNLKAALQGLTALGDAK*