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scnpilot_solids2_trim150_scaffold_1754_curated_13

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 12745..13206

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome b561 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UWK0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 148.0
  • Bit_score: 91
  • Evalue 1.10e-15
Putative transmembrane cytochrome b562 {ECO:0000313|EMBL:CDN95858.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 136.0
  • Bit_score: 156
  • Evalue 3.00e-35
putative transmembrane cytochrome b562 similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 149.0
  • Bit_score: 84
  • Evalue 2.50e-14

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
GTGAGCGGTTCTTGTTTGAATAGCCTCGTTCCGCCGGACAATCAGAGCTACACGCTGGCGCAACGGACGTTGCATTGGCTCGTGGTGGCGCTCTGTATCTCCCAGGTGCCAACATCATGGGCCATCGCCCGCACGCATATGGCTCACGGGTTCATGAAGCCCGATCCGTTCGATCTCTTCCTGCACAGTGTCCACGCCTGGAGCGGATGGGCCATTTTGGCTTTCGCCATCGTTCGCCTCGGGTTGAGGGTCGTTCAAGGCGTCCCCGAACTGCCTGACGGCTCATCAACGATGGTTCGCTGGGGATCAGCCACGAGCCACACGGTCCTCTATGCCTTGCTATTCGCGTTGCCTGTGACAGGCACCGGCGCGATGTACATCAGCGGCGCATTCGCCCCGGCTCACCGGTTTCTGACCTGGTGCTTGCTCGTTGTGGCAATCCTGCATGCGGTCGCGGCGCTA
PROTEIN sequence
Length: 154
VSGSCLNSLVPPDNQSYTLAQRTLHWLVVALCISQVPTSWAIARTHMAHGFMKPDPFDLFLHSVHAWSGWAILAFAIVRLGLRVVQGVPELPDGSSTMVRWGSATSHTVLYALLFALPVTGTGAMYISGAFAPAHRFLTWCLLVVAILHAVAAL