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scnpilot_solids2_trim150_scaffold_24320_curated_1

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(2..568)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 189.0
  • Bit_score: 335
  • Evalue 5.80e-89
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 189.0
  • Bit_score: 334
  • Evalue 1.70e-89
DNA-directed RNA polymerase subunit beta n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037C33E3 similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 189.0
  • Bit_score: 336
  • Evalue 1.80e-89

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GAAGAAGCGCTGAAGAACCTCGACGAAGCCGGTATCGTCTACATCGGCGCGGAAGTGCAGCCGGGCGACATCCTGGTCGGCAAGATCACGCCGAAGGGCGAAAGCCCGATGACGCCGGAAGAAAAGCTCCTGCGCGCCATCTTCGGCGAGAAGGCTTCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCATCGTCGAGGTGCGCGTCTTCAACCGCCACGGCGTGGAGAAGGACGAGCGCGCCATGGCGATCGAGCGTGAGGAGATCGAGCGCCTCGCCAAGGACCGTGACGACGAGCAGGCGATCCTCGACCGCAACGTCTATGCGCGCCTGTCGGACGTGCTCATCGGCAAGGAAGCGATTGCCGGGCCGAAGGGCTTCAAGAAGGGCTCGACGCTCGCCAAGGAAACGCTGGACGACTATCCGCGTTCGCAGTGGTGGCAGTTTGCCGTGGAGGACGAAAAGCTCCAGGGCGAACTCGAGGCTCTGCGCGGCCAGTACGACGATTCCAAGAAGGCGCTGGAGCAGCGCTTCATGGACAAGGTCGAG
PROTEIN sequence
Length: 189
EEALKNLDEAGIVYIGAEVQPGDILVGKITPKGESPMTPEEKLLRAIFGEKASXXXXXXXXXXXXXXXTIVEVRVFNRHGVEKDERAMAIEREEIERLAKDRDDEQAILDRNVYARLSDVLIGKEAIAGPKGFKKGSTLAKETLDDYPRSQWWQFAVEDEKLQGELEALRGQYDDSKKALEQRFMDKVE