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scnpilot_solids2_trim150_scaffold_97_curated_80

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(73646..74107)

Top 3 Functional Annotations

Value Algorithm Source
UPF0178 protein AGRO_4520 n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JH56_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 149.0
  • Bit_score: 223
  • Evalue 1.90e-55
UPF0178 protein Agau_C201312 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 149.0
  • Bit_score: 223
  • Evalue 2.60e-55
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 150.0
  • Bit_score: 220
  • Evalue 3.80e-55

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
GTGAACAAGCCCACCATCCTCGTCGACGCCGACGCATGTCCCGTGAAAGACGAGATCGTGAAGGTGGCGGAACGGCATGGCCTCCCCGTCACCTTCGTCGCCAATTCGGGCTTGCGGCCATCGCGCGACCCGATGATCCGCAACGTCATCGTGTCGGCCGGCTTCGACGCGGCCGACGACTGGATCGCCGAAAATGCCGGGGCGGGCGACATCGTGGTCACGGCAGATATCCCCCTGGCCGCCCGGGCACTTGAGAAAAGCGCGCTCGTCCTCGGCCCGACCGGCAGGGTCTTCACTCCTGAATCGATCGGCGCGGCGTTGGGCATGCGGGAACTCAACCGGCATCTGCGCGAGACCGGCGAATCGAAGGGCTACAACGCCGCCTTCACTTCGCGCGATCGATCTTCCTTCCTGCAGGCGCTCGACCGCCTGGTCCGGCAGGCATTGCGCGCTCCCGGCTAA
PROTEIN sequence
Length: 154
VNKPTILVDADACPVKDEIVKVAERHGLPVTFVANSGLRPSRDPMIRNVIVSAGFDAADDWIAENAGAGDIVVTADIPLAARALEKSALVLGPTGRVFTPESIGAALGMRELNRHLRETGESKGYNAAFTSRDRSSFLQALDRLVRQALRAPG*