ggKbase home page

scnpilot_solids2_trim150_scaffold_75_curated_120

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(142376..143452)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02129}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_02129};; Short=L-CDH {ECO:0000256|HAMAP-Rule:MF_02129};; EC=1.1.1.108 {ECO:0000256|HAMAP-Rule:MF_02129};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 363.0
  • Bit_score: 584
  • Evalue 7.90e-164
UPI0003D05789 related cluster n=1 Tax=unknown RepID=UPI0003D05789 similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 363.0
  • Bit_score: 584
  • Evalue 5.70e-164
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 363.0
  • Bit_score: 583
  • Evalue 5.20e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. L2C084A000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGACCATCACCAGAGCAGCCTGTATCGGCGGCGGCGTCATCGGCGCGGGCTGGGTGGCGCGGCTCGTGCTGAACGGGGTCGATGTCTCGATCTTCGATCCCGATCCGGAAGCGTCCCGCAAGGTCGGCGAGGTGATGAAGAACGCCCGCCGCGCATATAAGGCGATGGCGACCGGCGGCTTGCCGAAGGAAGGCAGGATCGCGTACGCGAAGTCGATCGCGGAGGCCGTTGCGGGCGCCGATTTCGTCCAGGAAAGCGTACCGGAACGCCTCGACCTCAAGCACAAGGTGCTGGCCGAGATCGACCGCCACGCCGCGCCTGACGCAATCGTCGGATCGTCCACCTCCGGCATCCTGCCGTCCGACATGCAGGCGGCGATGAAGCATGGCGACCGGCTCGTCGTCGCGCACCCCTACAATCCCGTCTATCTGCTGCCGCTGGTCGAGATCGTCGGCGGCAAGGATACCTCGAAAGCGGCGATCGTGAAGGCTAAGGAACTTTACGCCTCGATCGGCATGAAGCCTGTCGCCATCCGCAAGGAGATCGAGGCGTTCGTCGGCGACCGGCTTCTGGAAGCGGCATGGCGCGAATCGCTCTGGCTCATTAAGGACGGTATCTGCACCGTCGAGGAACTCGACGATATCATGCGCTACGGCTTCGGCCTCCGCTGGGCGCAGATGGGCATGTTCCAGGTCTATCGCGTGGCCGGCGGCGAGGCCGGCATGCGCCACTTCATGGCGCAGTTCGGGCCGTGCCTGTCATGGCCGTGGACGAAGTTGATGGACGTGCCGGAATTCAACGACGAACTGGTCGATCTGATCGCGACGCAATCCGACGACCAGTCCGGGAAATGGTCGATTCGCCAGCTTGAGAAGATACGCGACGAAAACCTCGTCGCGATCATGGAAGCGCTGTCGAAGACCAACAAGGGCAAGGGCTGGGGCGCCGGGGAACTGCATCGGGATTATGTGAAGAAGCTCGGCAAGATGGCGGCGAAGAAACCGCTCTCGAAGGCTGCGGCGAAGGCCAGGGCTGAGAAACCGAAGAAGGTAGTTGGGAAAGGGAAGCGAACGTGA
PROTEIN sequence
Length: 359
MTITRAACIGGGVIGAGWVARLVLNGVDVSIFDPDPEASRKVGEVMKNARRAYKAMATGGLPKEGRIAYAKSIAEAVAGADFVQESVPERLDLKHKVLAEIDRHAAPDAIVGSSTSGILPSDMQAAMKHGDRLVVAHPYNPVYLLPLVEIVGGKDTSKAAIVKAKELYASIGMKPVAIRKEIEAFVGDRLLEAAWRESLWLIKDGICTVEELDDIMRYGFGLRWAQMGMFQVYRVAGGEAGMRHFMAQFGPCLSWPWTKLMDVPEFNDELVDLIATQSDDQSGKWSIRQLEKIRDENLVAIMEALSKTNKGKGWGAGELHRDYVKKLGKMAAKKPLSKAAAKARAEKPKKVVGKGKRT*