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scnpilot_solids2_trim150_scaffold_1_curated_80

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(79894..80214)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 109.0
  • Bit_score: 101
  • Evalue 6.10e-19
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002ED6811 similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 107.0
  • Bit_score: 125
  • Evalue 3.70e-26
putative pilT protein, N-terminal, putative toxin of TAS system similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 109.0
  • Bit_score: 101
  • Evalue 1.80e-19

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Taxonomy

Nocardia brasiliensis → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGCGCGCCTTCTCGCAAGAGCGAGAGTTGTCCATTTCGCCAGTCAACTATGTAGAGGCCTGTGCGCGTTTGATGGGGCGTAACGAGAACCCGGATCAAGTCGATGAATTGATGGAACTGGCAAACATCCGCCTCGTGGAGGTAAGTGTCGAGCAAACCAAATTCGCCCGCGAAGCCTACCAGCGCTTCGGCAAGGGCAATCATCCGGCAAAGCTCAATCTCGGCGACTGCTTCGCCTATGCGCTTTCAAAGGCACGGGACGAACCGCTTCTGTTCAAGGGCGACGATTTCCTCAAGACCGATATCGAGGCGGCGCTTTGA
PROTEIN sequence
Length: 107
MRAFSQERELSISPVNYVEACARLMGRNENPDQVDELMELANIRLVEVSVEQTKFAREAYQRFGKGNHPAKLNLGDCFAYALSKARDEPLLFKGDDFLKTDIEAAL*