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scnpilot_solids2_trim150_scaffold_4805_curated_5

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(4378..4611)

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugal transfer protein trbD n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ET07_BRASB similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 77.0
  • Bit_score: 155
  • Evalue 2.40e-35
conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 77.0
  • Bit_score: 155
  • Evalue 7.60e-36
Putative conjugal transfer protein trbD {ECO:0000313|EMBL:ABQ39301.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 77.0
  • Bit_score: 155
  • Evalue 3.40e-35

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Taxonomy

Bradyrhizobium sp. BTAi1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
CCGGTTCACCGTTCACTGACCGAGCCGATCCTGCTGGGCGGCGCGCCGCGTGCCGTCGCGATCGTCAACGGCACGCTCGCCGCCGCGATCGGGCTCGGCCTTCGTCTTTGGATCGTTGGCGGCCTGATCTGGCTCATCGGCCATATCGCCGCCGTCTGGGCCGCGAAACGCGACGCCGCCTTCGTCGACGTCGTGCGCCGGCACCTGCGCTACCCGCAACATCTGGTCTCGTGA
PROTEIN sequence
Length: 78
PVHRSLTEPILLGGAPRAVAIVNGTLAAAIGLGLRLWIVGGLIWLIGHIAAVWAAKRDAAFVDVVRRHLRYPQHLVS*