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scnpilot_solids2_trim150_scaffold_3955_curated_8

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 4218..5828

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 537.0
  • Bit_score: 969
  • Evalue 1.70e-279
DNA-directed RNA polymerase subunit beta n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KRG4_MESAW similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 537.0
  • Bit_score: 962
  • Evalue 1.50e-277
DNA-directed RNA polymerase, beta subunit similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 537.0
  • Bit_score: 962
  • Evalue 4.70e-278

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1611
ATGGCCCAGACCCAGACGTTTAATGGCCGCAGGCGCGTGCGCAAGTTTTTCGGCAAGATCCCCGAGGTTGCGGAGATGCCGAACCTGATCGAGGTCCAGAAGGCCTCCTACGACCAGTTCCTCATGGTCGAGGAGCCTGAAGGCGGTCGTCTGGACGAAGGTTTGCAGGCGGTATTCAAGTCCGTCTTCCCGATTTCCGATTTCTCGGGGTCTTCGATGCTCGAATTCGTCAAGTACGAGTTCGAGGGGCCGAAGTTCGACGTCGACGAATGCCGCCAGCGTGACCTGACCTATGCGGCGCCGCTGAAGGTGACGCTGCGCCTCATCGTGTTCGATATCGACGAGGACACGCAGGCCAAGTCCATCAAGGACATCAAGGAGCAGGACGTCTATATGGGCGACATGCCGCTCATGACGTCGAACGGCACCTTCATCATAAACGGCACCGAGCGCGTGATCGTGTCGCAGATGCACCGTTCGCCGGGCGTCTTCTTCGATCACGACAAGGGCAAGTCGCACTCCTCGGGCAAGCTGCTCTTCGCCGCGCGCGTCATTCCCTATCGCGGATCGTGGCTCGATATCGAGTTCGATTCCAAGGATATCGTGCATGCGCGCATCGACCGCCGCCGCAAGATCCCGGTGACGAGCCTCTTGATGGCGCTGGGCATGGACGGCGAGGAGATCCTGTCGACCTATTACGACAAGATCAGCTACAAGCGTGCCGGTGACCATTGGCGCATTCCGTTCAACGTCGAGCGTTTTCGCGGTCTGAAGGCCGTCGGCGATCTCGTCGACGCCGACACGGGCGAAGTGGTCGTTGAAGCCGGCAAGAAGATCACCGCACGCCAGGCGCGCCAGCTCGCCGAGAAGGGCCTGAAGGCGATCAAGGTGACCGACGAGGACCTCATCGGCTCCTACATCGCGGAGGATATCGTCAATCCGGAGACGGGCGAGATCTATCTCGAGGCCGGCGACGAACTGGAGATGACGGTCGATCCCAAGACCGGCCAGCGCAAGGGCAATCTGGTCGATTTCCTCGATTCAGGCGAGGACGAGATCGAGATTCTCGACATCGACCACGTCAATGTCGGCGCCTACATTCGCAACACGCTGGCTGTCGACAAGAACGAGGGCCGCCAGGATGCGCTGTTCGACATCTATCGGGTGATGCGCCCCGGCGAGCCGCCGACGCTCGAGACGGCGGAAGCGATGTTCAATTCGCTGTTCTTCGATTCGGAGCGCTACGATCTTTCGGCCGTGGGCCGCGTCAAGATGAACATGCGCCTGGAACTCGATTGCCCGGACACGGTGCGCGTCCTGCGCAGGGAGGACATCCTTGCGGTCGTCAAGACGCTCGTCGAACTGCGTGACGGCAAGGGCGAGATCGACGACATCGACAATCTCGGCAACCGCCGCGTGCGTTCGGTCGGCGAGTTGATGGAGAACCAGTACCGCGTCGGCTTGCTCCGCATGGAGCGCGCGATCAAGGAGCGTATGTCCTCGATCGAGATCGATACGGTGATGCCGCAGGACCTGATCAACGCCAAGCCGGCGGCCGCCGCCGTGCGCGAGTTCTTCGGTTCCTCGCAGCTTTCGCAGTTCATGGACCAG
PROTEIN sequence
Length: 537
MAQTQTFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPEGGRLDEGLQAVFKSVFPISDFSGSSMLEFVKYEFEGPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTQAKSIKDIKEQDVYMGDMPLMTSNGTFIINGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLFAARVIPYRGSWLDIEFDSKDIVHARIDRRRKIPVTSLLMALGMDGEEILSTYYDKISYKRAGDHWRIPFNVERFRGLKAVGDLVDADTGEVVVEAGKKITARQARQLAEKGLKAIKVTDEDLIGSYIAEDIVNPETGEIYLEAGDELEMTVDPKTGQRKGNLVDFLDSGEDEIEILDIDHVNVGAYIRNTLAVDKNEGRQDALFDIYRVMRPGEPPTLETAEAMFNSLFFDSERYDLSAVGRVKMNMRLELDCPDTVRVLRREDILAVVKTLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQ