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scnpilot_solids2_trim150_scaffold_651_curated_16

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(15900..16301)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lo similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 135.0
  • Bit_score: 212
  • Evalue 4.00e-52
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 130.0
  • Bit_score: 205
  • Evalue 8.40e-51
DNA-directed RNA polymerase subunit omega n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWH0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 135.0
  • Bit_score: 212
  • Evalue 2.80e-52

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGGCGCGCGTTACCGTCGAAGACTGCATCGACAAGGTCGAGAATCGGTTTGAACTGGTGCTTTTGGCCAGCCATCGGGCGCGGGTCATCGCCAGTGGCTCGCCGATCACCATTGCGCGCGACAACGACAAGAATCCCGTTGTCGCGCTGCGCGAGATCGCCGACGAAACCGTCACGCCGGACGATCTCAAGGAAGAATTCGTCCACTCGCTGCAGAAATATGTCGAGGTCGACGAGCCGGAGGCCGAGACCGTGCCGCTGATCGCATCGTCCGCGACCGCGACTCCCGGCGGTGATGGCGCCGGTGAGGTGCAGTTCGACCGCATGTCGGAAGAGGACCTGCTGCGCGGCCTCGAGGGGCTGGTGCCGCCGAGCGACCGCGACGACGACGAGCGGGAATAA
PROTEIN sequence
Length: 134
MARVTVEDCIDKVENRFELVLLASHRARVIASGSPITIARDNDKNPVVALREIADETVTPDDLKEEFVHSLQKYVEVDEPEAETVPLIASSATATPGGDGAGEVQFDRMSEEDLLRGLEGLVPPSDRDDDERE*