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scnpilot_solids2_trim150_scaffold_454_curated_3

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(2994..4172)

Top 3 Functional Annotations

Value Algorithm Source
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 387.0
  • Bit_score: 427
  • Evalue 4.00e-117
Lipid-A-disaccharide synthase {ECO:0000255|HAMAP-Rule:MF_00392}; EC=2.4.1.182 {ECO:0000255|HAMAP-Rule:MF_00392};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 377.0
  • Bit_score: 427
  • Evalue 1.80e-116
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00037A9D1B similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 381.0
  • Bit_score: 430
  • Evalue 2.50e-117

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
TTGACCGGCGAGCGGCCGCGCAAGATTGTCCTGATCGCGGGTGAAGCTTCCGGCGACCATCTCGGCGCCGCCCTGATGGCGAGCCTGCGCGAGCGGCGGCCGGATGTGCGCTTTGCCGGCGTCGGCGGCCCGGCCATGGCGCGCTCCGGGCTGGCAAGCCTGTTTCCGATGGCCGACATCAACGTCATGGGCGTGCTGCCGGTCATTCGCAACCTGCCGATGCTGCTGGCGCGCATCAAGGCGACCGCCGCCGCAGTGCTGGCCGACCCGCCCGATGTCCTGGTGCTGATCGACGCGCCGGATTTCACCCATCGCGTGGCGCGCCGGGTGCGCAAGGCGCGGCCCGATATCCCGATCGTCGATTATGTGTCGCCGACCGTGTGGGCGTGGCGGCCGGGCCGCGCGCGCAAGATGCGCAGCTATGTCGACTACGTGCTGGCGCTGCTGCCATTCGAGCCGGCGGCGCATGCCAGGCTTGGCGGGCCGCCATGCAGCTATGTCGGCCATCCGCTGCTGGCGCGGCTCGATGAATTGCGGCCAAGCCCGGCGGAACAGGCGATCCGCGATGGCGAGCCGCCGGTCCTGCTGGTGCTGCCGGGCAGCCGACGTTCGGAAATCCACCACCTGATGCCGGTTTTCGGCGAGACGGTCGCGCAAGCGGCGGCGCTGTTCCCCGGTGCCCGTTTCGTGTTGCCGGCCGTCGATCACGTCCGCCCGGCGATCGAGGCGGCGCTGGCCGATTGGCCGGTCCGGCCGGAGGTGGTGAGCGGCGAGGCGGCGAAGCTGACGGCTTTCCGGCAGGCGCGCGCCGCGATGGCTGCCTCCGGCACGGTGACGCTGGAATTGGCGCTTTCCGGCGTGCCGGCGGTGGTGGCCTACAAGGGCTCCGGCCTTGAAGCCTTCATTGCCCGACGCCTGGTCACGCTCGCTTCGGTCGTGCTGCCGAACATCATCCTGGACGAGGTGGTGGTGCCCGAACTGTTGCAGGAAGCCTGCACGCCGCAGCGCCTGCTCGCGGCCTGGGCGCTGCTGATCGAGGATACCGAGGCACGCAAGCTCCACCTCGCGGCGCTGGCCCGCGTCGCCGACCGCATGCGGCTCGAAGAGGCAAGCCCCGGCGCGAAGGCGGCGGATATCGTGCTGCGCCATGCCGATGGTGCAAAAGAAAAAGGCGCCTGA
PROTEIN sequence
Length: 393
LTGERPRKIVLIAGEASGDHLGAALMASLRERRPDVRFAGVGGPAMARSGLASLFPMADINVMGVLPVIRNLPMLLARIKATAAAVLADPPDVLVLIDAPDFTHRVARRVRKARPDIPIVDYVSPTVWAWRPGRARKMRSYVDYVLALLPFEPAAHARLGGPPCSYVGHPLLARLDELRPSPAEQAIRDGEPPVLLVLPGSRRSEIHHLMPVFGETVAQAAALFPGARFVLPAVDHVRPAIEAALADWPVRPEVVSGEAAKLTAFRQARAAMAASGTVTLELALSGVPAVVAYKGSGLEAFIARRLVTLASVVLPNIILDEVVVPELLQEACTPQRLLAAWALLIEDTEARKLHLAALARVADRMRLEEASPGAKAADIVLRHADGAKEKGA*