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scnpilot_solids2_trim150_scaffold_3173_curated_6

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 3372..3977

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 200.0
  • Bit_score: 354
  • Evalue 1.30e-94
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 200.0
  • Bit_score: 352
  • Evalue 8.40e-95
3-isopropylmalate dehydratase small subunit n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=LEUD_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 200.0
  • Bit_score: 352
  • Evalue 2.70e-94

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGAAACCCTTTACCAAGCTGACGTCGGTCGCCGCGCCGCTCAAGGTGGTCAATGTCGATACCGACATGATCATCCCCAAGCAGTATCTGAAGACGATCCAGCGCACCGGGCTCGGCAAGGCGCTGTTCGCCGAGAAGCGCTATGACGACAAGGGCAACGAGAACCCGGATTTCGTGCTCAACAAGCCGGCCTATCGCAACGCGGAAATCCTCGTCGCCGGCGATAATTTCGGCTGCGGCTCGTCGCGCGAGCACGCGCCGTGGGCGCTGCTCGATTTCGGCATTCGCTGCGTGATCTCGACCAGTTTCGCCGATATCTTCTACAATAACTGCTTCAAGAACGGCATCCTGCCGATCAAGGTCAGCCAGGAAGACCTCGACAAGCTGTTCGACGATGCCGATCGCGGCTCCAACGCCACGCTGACCGTCGATCTCGCGGCGCAGGAGATCAAGGGCCCGGATGGCGGCACGGTGAAATTCGAGATCGATCCGTTCCGCAAGCACTGCCTGCTGAACGGGCTCGACGATATCGGCCTGACCATGCAGAAGCGCGCCGCGATCGACGGGTTCGAGCGCAAGGCCAGCGAAAGCCGGCCGTGGATGTAG
PROTEIN sequence
Length: 202
MKPFTKLTSVAAPLKVVNVDTDMIIPKQYLKTIQRTGLGKALFAEKRYDDKGNENPDFVLNKPAYRNAEILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFADIFYNNCFKNGILPIKVSQEDLDKLFDDADRGSNATLTVDLAAQEIKGPDGGTVKFEIDPFRKHCLLNGLDDIGLTMQKRAAIDGFERKASESRPWM*