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scnpilot_solids2_trim150_scaffold_1415_curated_3

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(1384..4572)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux transporter, HAE1 family, translocase subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBI7_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 999.99
  • Bit_score: 1569
  • Evalue 0.0
HAE1 family RND efflux transporter translocase subunit similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 999.99
  • Bit_score: 1569
  • Evalue 0.0
RND efflux transporter, HAE1 family, translocase subunit {ECO:0000313|EMBL:CCB63877.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 999.99
  • Bit_score: 1569
  • Evalue 0.0

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3189
ATGCGCTTTTCACATTTCTTCATCGACCGGCCGATCTTCGCGGCCGTGCTGTCGATCCTCATCACGATTACCGGGCTGATCGCCCAGCGCGCGCTGCCGATCTCGGAATATCCCGAGATCGCCCCGCCGACCGTCAGCATCACGGCGAGCTATCCCGGCGCGTCGGCGAAGGTGGTTTCCGAAACGGTGGCGACGCCGATCGAGCAGGAGGTCAACGGCGTCGACAACATGCTCTATATCGAATCGCAGTCGACCGGCGACGGCAACGTGACGATCAACGTCGTGTTCAAGCCCGGCACCGATGTCGACCAGGCGCAGGTGCTGGTGCAGAACCGCGTCGCGGTCGCCGAACCGCGCCTGCCCGAATCGGTGCGCCAGATCGGCATCACGACGCGAAAGGCCTCGCCCGACCTGATGATGGTCGTGCACATGCTGTCGCCTGACGATTCGCGCAGCGCGCAATATGTCTCCAACTACGCCACGCTCTACGTCAAGGACGTGCTCGGGCGGGTCGACGGCGTCGGCAACGTGCAGGTGTTCGGCGCGCGCGATTATGCGATGCGCGTCTGGCTCGACCCGGCCCGCGTGGCGGCGCGCAACCTGACCGCGAGCGAGGTCGTCGCCGCCATCCGTGCCGCCAACGTGCAGGTCGCGGCCGGCGCCATCAACCAGCCGCCGGCTTCGCCCGATGGCGCGTTCCAGCTTTCGGTGCAGACGCAAGGCCGCCTCGCCGACCCGGAGGAATTCGGCAATATCGTCATCCGCGCCGGCGACAATGGCGAGGTGGTGCGGGTGCGCGATGTGGCGCGCGTCGAACTCGGCGCGCAGGATTACAACGTCAATTCCTACCTCTCGAACAAGGTCGCGACCGCGATCGTGATCTTCCAGCGCCCGGGCTCGAATGCGCTGGCGACGAGCGCCGCCATCCTCCACCAGATGGAAACGCTCAAGAAGGATTTCCCGGCCGGCGTCGACTATTCGGTGGTCTACAACCCGACCGTCTTCATCCAGGAATCGGTCAACGAGGTCGTCAAGACGCTGTTCGAGGCGATGATCCTCGTCGTCATCGTGGTGATCCTGTTCCTGCAAACCTGGCGCGCGGCGATCATCCCGGTACTCGCCATCCCGGTCTCGCTGGTCGGCACCTTTTTGGTGATGGACGCCGCCGGCATCTCGTTCAACACGCTGTCGCTGTTCGGGCTCGTGCTGGCGATCGGCATCGTCGTCGATGACGCCATCGTGGTGGTCGAAAACGTCGAACGCTATCTGCGCATGGGCTACACGCCGAAGGAGGCCGCCCACAAGACGATGGACGAGGTCGGCGGCGCGCTGCTCGCCATCGCCATCGTGCTGTGCGCGGTGTTCATCCCGACCGCCTTCATCAGCGGGTTGCAGGGCTCGTTCTACCGCCAGTTCGCGGTGACGATCGCCGCCTCGACGGCGATCTCGTGCTTCGTCTCGCTGACGCTGTCGCCGGCGATGGCGGCGCTGCTGCTCAAGCCGCATGTCCATGACGCGCCGCAAACCGGCCTCCTCTACCGGCTTGGTGCGCCGCTGCGCTGGTTCTTCGGCCGGTTCAACCGCGCCTTCGAGGCGATGGGCAACGGCTATGCAAGGCTGACGCGCCGGCTCGTACGGGTGCTCGGCCTGATCCTCGTCGTCTATGCCGCACTGCTGGGCGCGACCTACTGGAGGCTCGAGGCGACGCCGACCGGGCTGATCCCGCAACTCGACCGCGGTTATTTCATCGCCGTGTTCCAGTTGCCGCCGGGTGCGACGCTCGAGCGCACCGACAAGGTCATCCGCCAGGCCGGCGACATCATCAAGGCGCGGCCGGGCGTCAAGGACTCGGTCGCCTTTACCGGTTTCGACGGCGCGACCTTCACCAACGCGCCCAATAGCGGCGTGATCTTCGTCAGCCTAAAGGATTTCGACGAGCGCGAGAAGGAGCACCTGACGACGCAGGGCATCCTCACGGACCTGCGCCAGCATCTGGCCGTGATTAACGACGCCTTCGTGCTGGTGCTGGAGCCGCCGGCCGTGCCCGGCATCGGCACCGGCGGCGGCCTGAAGGGCTATGTGCAGGATCGCAGCGGCGCAGGGCTGCCGGCGCTCGAAGGTGCTGCCTGGGCCGTTGCCGGCACGGCCGCGCACACGCCGGGGCTGACACAGGCCTTCACCCTGTTCAACACGCGCACGCCGCAGATCTATGCCGATATCGACCGCACCAAGGCGGAAATGCTCGGCGTGCCGATCAACCGCATCTTCGAGACGCTGTCGATCTATATGGGCTCGGCCTATATCAACGACTTCAACCTGCTCGGGCGCACCTATCGCGTCACCGCGCAGGCTGACAACCAGTATCGCCTGACGCCGCGCGACATCGCCAACCTGAAGACGCGCAGCGACAGCGGCGCCATGGTACCGATCGGCGCGGTGGCGAATTTCAACGACACCACAGGCGCCTATCGCGTGCCGCGCTACAACCTCTATCCGGCGGCGGAGGTGCAGGTGGCGCTCGCGCACGGCTTCTCCTCAGGGCAAGGCATCGCGGCGATGGAGAAGATCGCCAAGGAGAAACTGCCGGCCGGATTCGGCTTCGAATGGACCGAAATCGCGTTGCAGGAGAAGCTTGCCGGCAACACGGCGGCGATCGCCTTCGGCCTCGCGGTGGTGTTCGTGTTCCTGCTGCTGGCCGCCCTTTACGAAAGCGTGCTGCTGCCGCTGGCGGTGATCCTGATCGTGCCGATGTGTATCCTGGCGGCGATGATCGGCGTCAACCTGCGCGGCCTCGACCGCAATGTGCTGGTCGAGATCGGGCTGGTGGTACTGGTCGGGCTCGCCGCCAAGAACGCCATCCTGATCGTCGAGTTCGCCAAGCAGGGCGAGGACGAGGGCAAGTCGCGCTTCGAGGCGGCGGTCGAAGCCGCACGCACGCGCCTGCGGCCGATCCTGATGACCTCGCTCGCCTTCATCCTCGGCGTGGTGCCGCTGGTGATCGCGACGGGGGCCGGCGCCGAAATGCGCCAGTCGCTCGGCACGGCGGTGTTCGCCGGCATGCTCGGCGTGACGCTGTTCGGGCTGCTGTTCACCCCGGCCTTCTACGTGTTCACACGCTGGATCGCCGGGCTGTTCGGTAAGCGGCCGGTGCCCCACAGCGCACCGCCGGCCGAGATGCAGCCGCACTAA
PROTEIN sequence
Length: 1063
MRFSHFFIDRPIFAAVLSILITITGLIAQRALPISEYPEIAPPTVSITASYPGASAKVVSETVATPIEQEVNGVDNMLYIESQSTGDGNVTINVVFKPGTDVDQAQVLVQNRVAVAEPRLPESVRQIGITTRKASPDLMMVVHMLSPDDSRSAQYVSNYATLYVKDVLGRVDGVGNVQVFGARDYAMRVWLDPARVAARNLTASEVVAAIRAANVQVAAGAINQPPASPDGAFQLSVQTQGRLADPEEFGNIVIRAGDNGEVVRVRDVARVELGAQDYNVNSYLSNKVATAIVIFQRPGSNALATSAAILHQMETLKKDFPAGVDYSVVYNPTVFIQESVNEVVKTLFEAMILVVIVVILFLQTWRAAIIPVLAIPVSLVGTFLVMDAAGISFNTLSLFGLVLAIGIVVDDAIVVVENVERYLRMGYTPKEAAHKTMDEVGGALLAIAIVLCAVFIPTAFISGLQGSFYRQFAVTIAASTAISCFVSLTLSPAMAALLLKPHVHDAPQTGLLYRLGAPLRWFFGRFNRAFEAMGNGYARLTRRLVRVLGLILVVYAALLGATYWRLEATPTGLIPQLDRGYFIAVFQLPPGATLERTDKVIRQAGDIIKARPGVKDSVAFTGFDGATFTNAPNSGVIFVSLKDFDEREKEHLTTQGILTDLRQHLAVINDAFVLVLEPPAVPGIGTGGGLKGYVQDRSGAGLPALEGAAWAVAGTAAHTPGLTQAFTLFNTRTPQIYADIDRTKAEMLGVPINRIFETLSIYMGSAYINDFNLLGRTYRVTAQADNQYRLTPRDIANLKTRSDSGAMVPIGAVANFNDTTGAYRVPRYNLYPAAEVQVALAHGFSSGQGIAAMEKIAKEKLPAGFGFEWTEIALQEKLAGNTAAIAFGLAVVFVFLLLAALYESVLLPLAVILIVPMCILAAMIGVNLRGLDRNVLVEIGLVVLVGLAAKNAILIVEFAKQGEDEGKSRFEAAVEAARTRLRPILMTSLAFILGVVPLVIATGAGAEMRQSLGTAVFAGMLGVTLFGLLFTPAFYVFTRWIAGLFGKRPVPHSAPPAEMQPH*