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scnpilot_solids2_trim150_scaffold_1778_curated_7

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 6106..6768

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1S3_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 216.0
  • Bit_score: 161
  • Evalue 9.50e-37
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 216.0
  • Bit_score: 161
  • Evalue 3.00e-37
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACS22843.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 216.0
  • Bit_score: 161
  • Evalue 1.30e-36

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGGCCCGCGCTTCCGATGCAGCATACGAGACCATCAAGGGCTGGATCCAATCCGCCTCGATCCCGCCCGGCAGCCTGATCGACGAGGTCGAGGCCGCCAGGCGCCTCGCCATGAGCCGCACGCCGGTCCGCGAAGCACTTCTGAGATTGCAATCGGAAGGGTTCGTCGAAATCGCCCGGGGCAAGGGCATCCGCGTGCTGCCGCTATCGGCCAGCGACATGCGCGAGATCTACCAGGTGATTTCCGGCATCGAGGTCATGGCGGTGTCGTTGCTGACGCGGCGAGCGCCGACGCAGGCGACCGTCGCCGGGCTGGTCGAGGCGACCCAGCGCATGCACGAGGCCGCCGCAGCCGGCGACATCACCAATTGGGGCGAGGCGGACGAGCGATTCCACCGCGAGCTGATGCGGTTGTCCGGCAACAAGAAGCTGCATGCCGTCGGGTGTCAGTTGCGGGACTTCGCCAAGCGCGCCCATATCGTCGCCGTGCGCCTGCAGACGGATGCCTATCGCGCGCAATCCACCAAAAGCCACACGACCCTTATCAACAGCATTCTCGCCGGCGATGCGCGCGAGGCCGCGGCGCTGCATTTCAACCAGCGCGAGCGCGGCGAGAATGCCCTCGTCGGCATCGTTGAAAAATTCAACCTGACCAACCTCTGA
PROTEIN sequence
Length: 221
MARASDAAYETIKGWIQSASIPPGSLIDEVEAARRLAMSRTPVREALLRLQSEGFVEIARGKGIRVLPLSASDMREIYQVISGIEVMAVSLLTRRAPTQATVAGLVEATQRMHEAAAAGDITNWGEADERFHRELMRLSGNKKLHAVGCQLRDFAKRAHIVAVRLQTDAYRAQSTKSHTTLINSILAGDAREAAALHFNQRERGENALVGIVEKFNLTNL*