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scnpilot_solids2_trim150_scaffold_2518_curated_5

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(3890..4414)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000376AB6C similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 163.0
  • Bit_score: 181
  • Evalue 7.00e-43
tRNA/rRNA methyltransferase SpoU similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 164.0
  • Bit_score: 145
  • Evalue 1.30e-32
tRNA/rRNA methyltransferase SpoU {ECO:0000313|EMBL:AFU99214.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 /; SA1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 164.0
  • Bit_score: 145
  • Evalue 6.00e-32

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Taxonomy

Simiduia agarivorans → Simiduia → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGGCGAACCGGCAGCTCGACCATTTGCAGCATCGCCCGGCGCGTTCCGCGTTCGCGCTGCGCTACCTGGTGCACGACTTCGAGGTGCCGATGAACGTGGGCAGCGTGTTCCGCATTGCCGACGCGCTGGGGGTGGAGATGATCCACCTCACCGGCGCTTCGGCGGTGCCGCCCAACCGCAAGTTGCGCAAGACCTCGCGTGCGACCGAGCAGCACGTGCCGTTCCGCCACGACGACGATCCGCTGCCGGTAGTGCACGAACTGAAGGCCGCCGGCTACCGCATCGTCAGCCTGGAGCTGACCAGCGCCAGCATCGACATCCGCGAGTTGCCGGTAGCCGCGGGCGAGCGCATCTGCCTGGTGCTCGGTTCGGAGAACCGCGGCGTAAGCCAGGCCCTGCTGGACGGCTCCGACCAGACCGTGCACATCCCCATGCTGGGCGCGCATTCGTCGATGAACGTGGCCACCGCCTGCGCGATCGCGACGTTCGAAATCATCCGCGCGTTTCCGGTGCCGCCGGCCTGA
PROTEIN sequence
Length: 175
MANRQLDHLQHRPARSAFALRYLVHDFEVPMNVGSVFRIADALGVEMIHLTGASAVPPNRKLRKTSRATEQHVPFRHDDDPLPVVHELKAAGYRIVSLELTSASIDIRELPVAAGERICLVLGSENRGVSQALLDGSDQTVHIPMLGAHSSMNVATACAIATFEIIRAFPVPPA*