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scnpilot_solids2_trim150_scaffold_1312_curated_16

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(21046..22449)

Top 3 Functional Annotations

Value Algorithm Source
Putative efflux protein, MATE family n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE29_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 461.0
  • Bit_score: 845
  • Evalue 3.00e-242
Putative efflux protein, MATE family {ECO:0000313|EMBL:EIL97720.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 461.0
  • Bit_score: 845
  • Evalue 4.20e-242
putative efflux protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 461.0
  • Bit_score: 842
  • Evalue 8.10e-242

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGAATCCGTTTCGTCCCGAGCGTGCGCGCCTGCGGCATGAGGTGCGCGCCACCGTGCGCCTGGCGCTGCCGTTGATCGCCGCGCAGCTGGCGGCGGTCGGCAGCAACGTGATCGACGCGGTGCTGGCCGGCCACGTCAGCGCGCACGTGCTGGGCGCGGTGGCGGTGGGCGCCAGCATCTGGTCGCTGGCGATCGTCTGCGGCATCGGCATGATGATGGCGGTGCCGCCGTCGGTGGCGCAGCTGGACGGTGCCGGTCGGCGCCATGAGGTCGGCGCGGTGTTCCACCAGGCGCTGTGGCTGGCGCTGGGCATGGGCGCGCTGCTGTGGTTCGCGGTGCGCCATGCGGAGCCGCTGATCGAGCTGATCGGGGTGACGGCGAGCCTGCGCCACGACGTGCAGCGCTTCCTGCTGGCGATCAGCTGGGGCGCGCCGGCGCTGACTTGCTATTTCGCCTTGCGCGGCCTGTCCGAAGGCCTGTCGATGACGCGGCCGTCGATGTACTTCAGCCTCGGCGGGCTGGTGCTGCTGGTGCCGCTGGGCTATGTATTGATGTTCGGCAAGCTGGGCATCCCGCCGCAGGGCGCGCACGGCTGCGGCGTGGCCACCGCGATCGTGTTGTGGCTGGAGTTGCTGGCGTTCGGCATCTACGTGATCTTCCGGCGCAACTACCGCGGGCTGGGCCTGTTCGAGCGCTTCGAGTGGCCGGACCTGCACCGGATCGGCCAACTGGTGCATATCGGGGCACCGATGGCGGTGACGCTGCTGGCTGAGGCCGGATTGTTCGTGGCCACCGCGCTGATCATCGCCACCCTGGGCGAGGACGTGATCGCCAGCCACCAGGTGGCCATCAACATTGCCTCGCTGTTCTTCATGATCCCGCTGGGCCTGGCGATGGCAATCACCGTGCGGGTGGGCAACGCGGTGGGTCGCGGCGACGAGCAGGGGGTGCGCTACGCCGGCTTCTGCGGCATCGGCCTGACGCTCGGGACGCAACTGCTGTCGGCGGCGCTGATGCTGAGCCTGCCGCACTTCATCGCGTCGCTGTATACGCACGACAACCGGGTGATCGCGCTGGCCGCGCAGCTGATCATGCTGGCCGGACTGTTCCAGTTCTCCGATGGCGTCCAGGTCGCCGCCAACGGCGCGCTGCGCGGGTTGAAGGACACCCGCGTGCCGATGGCGATCACCTTGTTCTCGTACTGGGTGGTAGGCATGCCGGTGGGCTGGTGGCTGGCCTTCCACCACGGCATGGGCGCGCGCGGCATGTGGGTCGGCCTGATCGCGGGCCTGTCGGTGGCGGCGGTGATGCTGTTCGTGCGGTTCTGGCGCAGCGCGTGGAAGCAGCGCTGGCGGGCGGCTGCCATGACCGCCGTGGCCCGACCGGTTACGCTTGACGCCTGA
PROTEIN sequence
Length: 468
MNPFRPERARLRHEVRATVRLALPLIAAQLAAVGSNVIDAVLAGHVSAHVLGAVAVGASIWSLAIVCGIGMMMAVPPSVAQLDGAGRRHEVGAVFHQALWLALGMGALLWFAVRHAEPLIELIGVTASLRHDVQRFLLAISWGAPALTCYFALRGLSEGLSMTRPSMYFSLGGLVLLVPLGYVLMFGKLGIPPQGAHGCGVATAIVLWLELLAFGIYVIFRRNYRGLGLFERFEWPDLHRIGQLVHIGAPMAVTLLAEAGLFVATALIIATLGEDVIASHQVAINIASLFFMIPLGLAMAITVRVGNAVGRGDEQGVRYAGFCGIGLTLGTQLLSAALMLSLPHFIASLYTHDNRVIALAAQLIMLAGLFQFSDGVQVAANGALRGLKDTRVPMAITLFSYWVVGMPVGWWLAFHHGMGARGMWVGLIAGLSVAAVMLFVRFWRSAWKQRWRAAAMTAVARPVTLDA*