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scnpilot_solids2_trim150_scaffold_5311_curated_4

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 4162..5100

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 307.0
  • Bit_score: 460
  • Evalue 2.60e-126
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 307.0
  • Bit_score: 455
  • Evalue 1.90e-125
tRNA pseudouridine synthase B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6K1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 307.0
  • Bit_score: 460
  • Evalue 1.80e-126

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAGCAAACCACCCCGCATCCAGTATCGCGACCTGCACGGGATCGTGTTGCTCGACAAGCCGGTCGGCTTGAGCTCGAACCAGGCATTGCAAGGCGTTCGCCGGCTGTTGCGCGCGGCCAAGGGCGGCCATGCCGGGGCGCTCGACCCGCTGGCCAGCGGTCTGCTGCCGCTGTGTTTCGGCGAGGCCACCAAGCTGGCCGGCACGCTGCTCGGCGCCAGCAAGGGCTATGTAGCTGAATGCCGGCTTGGCATCAGCACCGACACCGGCGACCGCGAGGGCGAGGTGACCGCACGCCAGCCGGTGCCTCGACTCGACCCCGCACTGATCGAAGCCGCGCTGGCGCCGCTGCGGGGAGCGATCCGGCAGGTGCCGCCGATGTATTCGGCGCTCAAGCAGGACGGCGAAAGGCTGTACGTGAAGGCGCGCCGCGGCGAGTCGGTGGAGCGGCCGGCGCGCGACGTGGTCGTGCATCGGCTGGAGCTGCTCTCGCGCGACGGCGATACCTTGCAGTTGCTGGTGGAATGCGGCTCGGGGACCTACGTCCGCTCGCTGGCGACGGATCTGGGCGCGGCCCTGGGCTGTGGCGCACACCTGACCGCGCTGCGACGCACCTGGGTGGACCCCTTCCGCCATCCGCGCATGGTCACCATGGCCGAACTCGAACAGGCGGCGGAGCAGGGCGACGAGGCGTTGTTGCGGCATCTGCTGCCGGTGGCCGAGGGGCTGCGCGACCTGCCGTGGGTTCACCTCGACGAGGCGCAGGCGATGGCCATTTCGCGCGGCCAGTCGATTCAGCTTGACCCATCGGTATCCGCCGGTCGCTGCGCAGCATTCGCGCCTGATGGTGCCCTGGTTGCCGTGCTCGAACTGGATGACCTGCACCACAGCCGCATCCTGCGCGGCTTCAACCTGCCGCCAGCGGACGGATTTGCCTGA
PROTEIN sequence
Length: 313
MSKPPRIQYRDLHGIVLLDKPVGLSSNQALQGVRRLLRAAKGGHAGALDPLASGLLPLCFGEATKLAGTLLGASKGYVAECRLGISTDTGDREGEVTARQPVPRLDPALIEAALAPLRGAIRQVPPMYSALKQDGERLYVKARRGESVERPARDVVVHRLELLSRDGDTLQLLVECGSGTYVRSLATDLGAALGCGAHLTALRRTWVDPFRHPRMVTMAELEQAAEQGDEALLRHLLPVAEGLRDLPWVHLDEAQAMAISRGQSIQLDPSVSAGRCAAFAPDGALVAVLELDDLHHSRILRGFNLPPADGFA*