ggKbase home page

scnpilot_solids2_trim150_scaffold_3941_curated_3

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 2430..3368

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor jumonji JmjC domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5H3_THIK1 similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 302.0
  • Bit_score: 305
  • Evalue 4.40e-80
transcription factor jumonji JmjC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 302.0
  • Bit_score: 305
  • Evalue 1.40e-80
Transcription factor jumonji JmjC domain protein {ECO:0000313|EMBL:ADG31866.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 302.0
  • Bit_score: 305
  • Evalue 6.20e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiomonas intermedia → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGCTGGGCAGATTCATTTCCTCCGGTCATTACGCCGAACTGCTCGCCCGAGGTCTTCAAGCCGGGCCGCGCATGCTCGAGCTCGACCCCGCGCAACTGGCTCGTCACTACAATCGGCAGCCGTTCGCGTTCGCCCATGCCTTGGCCGGCAACGAATACTTCGCATTGCCTCGCCTGTTCGACCTGTGCCGGCGCATGGATCCACGCAAGATCCGCTACCGGGTCGGCGAGATTCCCGACAACGCGCACTTCGACAGTTCATTCGATCGGTACAAGGCAGGCCTGAGCCTTGAAAAGGCGATCGATCGATTCGAGGAAGAGCGTGCCTACGTCGTCATCTACAACCCCGAGCTGGACCCGGAATACCGGGTGGTCATCGAAGGTGTGCTGGCCGAGATCGCCGCGCACACCGCCGCGCTCGATCCGGGACTGACCTGGTACTCGACCTACATCTTCATTTCCACACGCGATGCCGTCACCCCTTATCACATGGACCGGGAGATGAACTTCCTGTGCCAGATCCGCGGCACCAAGCGCGTGCAGCTGTGGGATTCGGCCGACGAGGAGGTGATGACCGACGCGCAGAAGGATCTGCTGCTCGCCCACATCGGCGAGCGGCCACCGTTCCGGGATGCGCTCGAGAGCAAGGCGAGCACATTCAACCTGGTCCCCGGCCTGGGCGTGCATCAGCCGTTCATTGCCCCACACCGGGTGTACACCGGAAAGGAGCTGTCGGTGACTTTGGCAGTCACCTATCGCACGCGTGGCTCGGACGTGCGCACGGCTGCGCACGTCTTCAATGCGAAACTGCGTCGGCTCGGCTGGCGGCCACAGCCGGTCGGCCGCTACCGCACACTCGACCGCTGCAAGGCGACTGGCTTGCGTCTGTTCCGGCGTGGACGCGGCCTGCTCGGGGGCCGGGACGGCGGATCGGCGTGA
PROTEIN sequence
Length: 313
MLGRFISSGHYAELLARGLQAGPRMLELDPAQLARHYNRQPFAFAHALAGNEYFALPRLFDLCRRMDPRKIRYRVGEIPDNAHFDSSFDRYKAGLSLEKAIDRFEEERAYVVIYNPELDPEYRVVIEGVLAEIAAHTAALDPGLTWYSTYIFISTRDAVTPYHMDREMNFLCQIRGTKRVQLWDSADEEVMTDAQKDLLLAHIGERPPFRDALESKASTFNLVPGLGVHQPFIAPHRVYTGKELSVTLAVTYRTRGSDVRTAAHVFNAKLRRLGWRPQPVGRYRTLDRCKATGLRLFRRGRGLLGGRDGGSA*