ggKbase home page

scnpilot_solids2_trim150_scaffold_5973_curated_1

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 2..415

Top 3 Functional Annotations

Value Algorithm Source
Cation/multidrug efflux pump n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 136.0
  • Bit_score: 228
  • Evalue 3.00e-57
Cation/multidrug efflux pump {ECO:0000313|EMBL:EIL93639.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 136.0
  • Bit_score: 228
  • Evalue 4.20e-57
cation/multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 137.0
  • Bit_score: 225
  • Evalue 8.10e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
CTGTCGCTGATGGCGATCATCGCGATCCTGATGCTGATCGGCATCGTCAAGAAAAACGCGATCCTGATGGTCGACTTCGCCCTGGTGCGCGAACGCGAGCACGGCATGGCCGCACCCGACGCGATCCGCGAGGCGGCGCTGGTGCGCTTCCGCCCGATCACCATGACCACCCTGGTCGCGATGGGCGCGGCGATGCCGCTGGCGATCGGCTTCGGCATCGGCTCGGAAATGCGCCAGCCGCTGGGCATCGCCATCGTCGGCGGCCTGCTCGTGTCGCAACTGCTGACCCTGCTCAGCACTCCGGCGATCTACCTGTGGAACCACGACCGCAAGATCCGCAAGGCGGCGCGCAAGGCGCGCAAGGCGGAGAAGAAGCGGCGCAAGGCGCCGGGTGGGGCGCAGGTGGTGACGTGA
PROTEIN sequence
Length: 138
LSLMAIIAILMLIGIVKKNAILMVDFALVREREHGMAAPDAIREAALVRFRPITMTTLVAMGAAMPLAIGFGIGSEMRQPLGIAIVGGLLVSQLLTLLSTPAIYLWNHDRKIRKAARKARKAEKKRRKAPGGAQVVT*