ggKbase home page

scnpilot_solids2_trim150_scaffold_23061_curated_3

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(842..1477)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXS0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 188.0
  • Bit_score: 347
  • Evalue 9.00e-93
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIL92011.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 188.0
  • Bit_score: 347
  • Evalue 1.30e-92
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 211.0
  • Bit_score: 340
  • Evalue 3.40e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGATGAGTCCGGATCGCTCTGCCACCGAGGTGACGCCCTTTCGGGCGATACGACCCGTGCCTGCCGCCGTGAACCACGCCATGCCTGACACACGTTACTGGTCGACGCAGATGGCCGCCGTGTCGGCGCAGCGCGACCGCGCGAGTTTCATGCGCATCTTCGACCACTTCGCGCCGCGCCTGCAGCGCTACCTGCGCAACCTAGGCGTACCCGAATCGATCGCCGACGAGCTGGTGCAGGAGGCCTTGCTGACGCTGTGGCGCAAGGCCGCGATGTTCGATCCGGCGCGCGCCAGCCTCGCCACCTGGCTGTATCGCGTGGCGCGCAACCTCTACATCGACCACGTGCGCAGGGAACCGCACTGGTCACCGATCCAGGAAGGCCTGGACCAGCTCGACCAGCTCGAATCCGGTCGGCTCGACTCGCAACCCGAATCCTCCTTCGACCAGGACCTGCTGAAGCAGGCCATCGATCAACTGCCGCCGTTACAGGCCAAGCTGGTTCGCATGTGTTACCTCGAAAGCAAGAGCCACAGCGAGATCGCCCGCGAGCTGGACATGCCGTTGGGTTCGGTCAAATCCTCGCTGCGGCGCTCGTTCGCCAAATTGCAGGGCAGCATGAGGGGGGCGCGATGA
PROTEIN sequence
Length: 212
MMSPDRSATEVTPFRAIRPVPAAVNHAMPDTRYWSTQMAAVSAQRDRASFMRIFDHFAPRLQRYLRNLGVPESIADELVQEALLTLWRKAAMFDPARASLATWLYRVARNLYIDHVRREPHWSPIQEGLDQLDQLESGRLDSQPESSFDQDLLKQAIDQLPPLQAKLVRMCYLESKSHSEIARELDMPLGSVKSSLRRSFAKLQGSMRGAR*