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scnpilot_solids2_trim150_scaffold_2768_curated_12

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 10376..10933

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 179.0
  • Bit_score: 284
  • Evalue 1.10e-73
shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 177.0
  • Bit_score: 283
  • Evalue 5.70e-74
Shikimate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ54_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 175.0
  • Bit_score: 288
  • Evalue 4.30e-75

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGAATCCGTCGTGCAACCTGTTCATCGTCGGTCCGACCGGTGCCGGCAAGACTTCGGTCGGCAGGCGGCTCGCCGTGCATTATGGGCTCTCGTTCGTCGATCTCGACCAGGAGGTCGAGCAACATTGCGGCGTGGACGTGGGCACGGTGTTCGAGGTCGAGGGCGAAGCCGGCTTTCGCGAGCGCGAAAGCGCGCGCCTGGACGCGCTGAGCCAACGTTCCGGCGTGCTGCTGGCGACCGGCGCCGGCGCCGTGCTGGCCGCCGACAACCGCCGCTGGCTGGCCCGGCGCGGTTTCGTGGTGTGGCTGCAGGCCAGCATCGAGCAACAACTCGAACGCCTCGAACGCGACCATCGTCGCCCGCTGCTGGCCGTGCCCGACCGCGTCGCGCGGCTGCACGCGATGGCCGCCGCGCGCGAGCCGATCTACCGCGAACTTGCCGACCTCGCCGTGCCCGGCCACCATGGCAGCGTCGGCGCCGCCAGCGAACGCTGCATCGAACTGATCGACGCGCACTGGCAGCGCGAATCCCCTTTTTCATCCGCGCACCACGCATGA
PROTEIN sequence
Length: 186
MNPSCNLFIVGPTGAGKTSVGRRLAVHYGLSFVDLDQEVEQHCGVDVGTVFEVEGEAGFRERESARLDALSQRSGVLLATGAGAVLAADNRRWLARRGFVVWLQASIEQQLERLERDHRRPLLAVPDRVARLHAMAAAREPIYRELADLAVPGHHGSVGAASERCIELIDAHWQRESPFSSAHHA*