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scnpilot_solids2_trim150_scaffold_4844_curated_2

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1504..4179

Top 3 Functional Annotations

Value Algorithm Source
RNAse R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 896.0
  • Bit_score: 1531
  • Evalue 0.0
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 896.0
  • Bit_score: 1531
  • Evalue 0.0
Ribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=M4NGE8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 896.0
  • Bit_score: 1531
  • Evalue 0.0

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2676
GTGACCAGAAAGACTCCCCCCACGTCCGGCCGTTCTCCGGATGCGCGCCCCGCGAAGAAAGCCGCCAGGCGGTCCTCGCGCGGGCCATCCGCGCCGGACAAGCGCGGCAAGTCTGCCGCCGGCGCCGTGCGCGACCCGCACGCCGAGCGCGAGGCGCAGCGTTACGCGCGCCCCATCCCCAGCCGCGAGGCGATCCTTGCCTTGCTCGAGCAGCGCGGCGAACTGTTGACCGAGGCGCGCATCGCCGACGCGCTGCAGATCCACGACGAAGTCGACCTCGAAGCGCTGCGCAAGCGTCTCGCGGCGATGGTGCGCGATGCGCAATTGCTGCTGGGCCGTCGCGGCGGCTACGCGCCAACGCGCAAGCTCGACCTGATCGCCGGCCGCGTGCTGGCCAACGCCGAGGGCTATGGTTTCCTGCGCCCGGACGAGGGCGGCGAGGACCTGTACTTGTCGCCGCAGCAGATGCGCACCGTGCTGCATGGTGATCGCGTGCTGGCCAGCGTGGTCGGCATCGACCGTCGTGGCCGCAAGCAGGGCGCGATCGCCGAAGTGCTGGAACGTCGCTCGCCGCGGCTGGTCGGCCGCGTGCTGATCGAGGACGGCGTCACCCTGGTCACGCCCGACGACCGCCGCCTGAACCAGGACGTGATGATCAAGCCGGGCCAGGAGCAGGGCGCCCGGTCCGGCCAGATCGTGGTGGTGGAAATCACCGATCCGCCGACCCCGTACCGCGGCCCGCTGGGCGAGATCCGCGCGGTGCTGGGCGATCGCCTGCAGCCCTCGCTGGTGGTGGAAATGGCGATCGCCAGCCACGACCTGCCGCACGAATGGCCGGCCGAGGTGCTGCGCGATGCGGCGCAGGTGGAGGCGGAAGTCACCGCCGCCGAGCGGGAAGGCCGTACCGACATCCGCAAGCTGCCGCTGGTCACCATTGACGGCGTCGACGCGCGCGATTACGACGATGCGGTATACGCCGAGCCGCGGCGCGGCGGCGGCTGGCGGCTGATCGTGGCGATCGCCGACGTATCGCACTACGTGCAGGTCGGCAATGCGCTCGACCGCGAGGCGTACGAGCGCAGCACCTCCACCTATTTCCCCGGCTTCGTGGTGCCGATGCTGCCGGAGACGCTGTCCAACGGCATCTGTTCGCTGAACCCGAAAGTGGACCGGTTGTGCATGGCTTGCGACATGACGGTCGACGCCGAAGGCAACGTCACCCGCGCGAAATTCTACGACGCGGTGATGCGCTCGCACGCGCGGCTCACCTACGACAAGGTGTGGCAGGCAGTGGGCCTGCGCGAGAAGGACGCGCGCCACGAGGTGGCCGACGTGCTGCCGCAACTCGAAAACCTGCACGCGCTGTACAAGGCGATGGCCGCGCAGCGCAAGCGTCGCGGCGCGATCGATTTTGAAACGCCGGAGGTGAAGTTCCGCCTCGACCAGCGCGGCGAAGTGGAGTCGATGGGTGCCACCGAGCGCAACGACGCGCACAAGCTGATCGAGGAATGCATGATCGCCGCCAACGTGCAGGCGGCGCTGTTCCTGGAGAAGAGGAAAATCCCCGCGCTGTTCCGCGCGCACGAGCCGCCACCGGCGGAGAAGTACGAGGACCTGCAGCAGTTCCTGCGCGAGTTCAAGCTGCGCATGCCGCCGGTGGACGAGGTGACCCCGGCGGATTTCGCCGAGATCCTGACCCTGGTGCGCGACCGGCCCGAGCGCGAACTGATCCAGAGCGTGCTGCTGCGCTCGCAGAGCATGGCGGCCTACCAGCCCGACAACCGCGGCCACTTCGGCCTCGCCTTGCAGGCGTATGCGCATTTCACCTCGCCGATCCGCCGTTATCCCGACCTGCTGGTGCATCGCGCGATCCGCTACGCGCTGAGCGGGGGCAAGCCGGCGGATTACACCTATACGCCGGCCGCGATGGCGGCGATGGCCGTGCATTGCTCGCAGCGCGAACGCCGCGCCGAGGAAGCCGAGCGCGACGTCGACGAGCGCTTCAAGTGCGCGTGGATGGCCAAGCATGTCGGCGAGGATTTCGACGGCGTGGTCACCGGCGTCACCTCGTTCGGCCTGTTCGTGGAACTGGATGAATCGAAAGTCTCCGGCCTGGTGCACATCAGCCAGCTGGTGAACGATTACTACCATTTCGACGCGACGCGGAAGCTGCTCAAGGGCGAGCGCACCGGGGCGCAGTTCCGCCTGGGCGACCACGTGCGTATCAAGGTGCTGCGCGCCAGTCTGGAGGATCGCAAGATCGACTTCCGGCTGGTTTCCCCGCGGCCGTCGGCTCCGCCACCGACGGGCAGCGGCAAGGCGTACGACTATGCCGCCGCCGGCGAACGCTACTCGCTGCCGAAGAAGGCGGCCGCCGCGGACAAGGCGCCCGGCGTGTTCGGCCGTGCGGCGAAGGCGATCGGCCGCGCGTTCGGTCGCAAGCAAGCCGAGGTCGCCGCGCCGTCGCCGGCCCCGCGCAAGGCGGCTGCAAGCGCCAGTCCGCCGTCGCATTCGCCGGCGACACGCAGCGAATCGGGCCCGGGCCGCAAGGCCAAGGCGCCGTCCTCCCGTGGCCCGCACAAGCAGGCTTCATCCCGGCGTGATCCGGCACTGGCCGGCAAGCCCGCGCCGAAGAAGAACCCGCAGCGTCGATCCAAACCGAAAGGCAAGTCATGA
PROTEIN sequence
Length: 892
VTRKTPPTSGRSPDARPAKKAARRSSRGPSAPDKRGKSAAGAVRDPHAEREAQRYARPIPSREAILALLEQRGELLTEARIADALQIHDEVDLEALRKRLAAMVRDAQLLLGRRGGYAPTRKLDLIAGRVLANAEGYGFLRPDEGGEDLYLSPQQMRTVLHGDRVLASVVGIDRRGRKQGAIAEVLERRSPRLVGRVLIEDGVTLVTPDDRRLNQDVMIKPGQEQGARSGQIVVVEITDPPTPYRGPLGEIRAVLGDRLQPSLVVEMAIASHDLPHEWPAEVLRDAAQVEAEVTAAEREGRTDIRKLPLVTIDGVDARDYDDAVYAEPRRGGGWRLIVAIADVSHYVQVGNALDREAYERSTSTYFPGFVVPMLPETLSNGICSLNPKVDRLCMACDMTVDAEGNVTRAKFYDAVMRSHARLTYDKVWQAVGLREKDARHEVADVLPQLENLHALYKAMAAQRKRRGAIDFETPEVKFRLDQRGEVESMGATERNDAHKLIEECMIAANVQAALFLEKRKIPALFRAHEPPPAEKYEDLQQFLREFKLRMPPVDEVTPADFAEILTLVRDRPERELIQSVLLRSQSMAAYQPDNRGHFGLALQAYAHFTSPIRRYPDLLVHRAIRYALSGGKPADYTYTPAAMAAMAVHCSQRERRAEEAERDVDERFKCAWMAKHVGEDFDGVVTGVTSFGLFVELDESKVSGLVHISQLVNDYYHFDATRKLLKGERTGAQFRLGDHVRIKVLRASLEDRKIDFRLVSPRPSAPPPTGSGKAYDYAAAGERYSLPKKAAAADKAPGVFGRAAKAIGRAFGRKQAEVAAPSPAPRKAAASASPPSHSPATRSESGPGRKAKAPSSRGPHKQASSRRDPALAGKPAPKKNPQRRSKPKGKS*