ggKbase home page

scnpilot_solids2_trim150_scaffold_4844_curated_6

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(5717..6415)

Top 3 Functional Annotations

Value Algorithm Source
RNAse T (EC:3.1.13.-) similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 218.0
  • Bit_score: 382
  • Evalue 8.70e-104
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051955};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 218.0
  • Bit_score: 382
  • Evalue 3.90e-103
Ribonuclease T n=1 Tax=Rhodanobacter denitrificans RepID=I4WY13_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 218.0
  • Bit_score: 382
  • Evalue 2.80e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGATATCGTCAACAAGCCCATCGCGGCGCGCATGGCCGAGCGCTTCCGTGGTTTCCTGCCGGTCGTGGTCGACGTGGAGACCGGCGGCTTCGATGCCGAACACGATGCGCTGCTGGAGATCGCCGCGATACCGCTGCGCATCGACGAGGCCGGCTTCCTGAGCAGCAAGGAGCTGGTCTCCACCCATGTGGAGCCATTCCCCGGAGCCAACCTCGACCCCCGATCGCTGGAGATCACCGGGATCGATCCGGACAACCCCCTGCGCGGCGCCCTGCCCGAACGCCAGGCCCTGGACCACGTCTTCCAGGTGGTGCGCGAGGCCGTCCGCGAGGCCGGCTGCCAGCGCGCGATCCTGGTCGGCCACAATGCCGCGTTCGACCTGGGCTTTCTCAACCAGGCGGTGCGCCGCTGCGGGCACAAGCGCAATCCGTTCCATCCGTTCAGCTGTTTCGACACGGTCAGCCTGGCCGGCCTGGCTTACGGCCAGACCGTGCTGAGCAAGGCGGTGCTGGCGGCAGGACTGAGCTTCGACAGCCGCGAGGCGCATTCGGCCGTCTACGACGCCGAACGCACCGCCGAGCTGTTCTGCAGCATCGTCAATCGCTGGCGGCAACTGGAACTGCTGGAACAGGCACACGCGGGCCTGAGCACCCCGCTGGCACAGGACCGGAGCGGAAGCGAGCCGACGGGTTCCTAA
PROTEIN sequence
Length: 233
MDIVNKPIAARMAERFRGFLPVVVDVETGGFDAEHDALLEIAAIPLRIDEAGFLSSKELVSTHVEPFPGANLDPRSLEITGIDPDNPLRGALPERQALDHVFQVVREAVREAGCQRAILVGHNAAFDLGFLNQAVRRCGHKRNPFHPFSCFDTVSLAGLAYGQTVLSKAVLAAGLSFDSREAHSAVYDAERTAELFCSIVNRWRQLELLEQAHAGLSTPLAQDRSGSEPTGS*