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scnpilot_solids2_trim150_scaffold_1972_curated_10

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(7534..8547)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 334.0
  • Bit_score: 599
  • Evalue 3.80e-168
tRNA pseudouridine synthase D n=2 Tax=Rhodanobacter denitrificans RepID=M4NNZ0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 334.0
  • Bit_score: 599
  • Evalue 2.70e-168
tRNA pseudouridine synthase, TruD family similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 334.0
  • Bit_score: 599
  • Evalue 8.60e-169

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGCAAGAACTTCCCCGTGCTTTCGGCGAACCGCCACTGACCGCGCGTCTGCGGGCCAGCCCCGAGGACTTCCTGGTCGAGGAGATCCTCGGCTACGACGCGGACGGTGCCGGCGAGCACCTGCTGCTGTGGGTGGAGAAGCGTGGCGCCAACACCGACTGGGTCGCGCGCGAGCTGGCGAAGTTCGCCGGCGTGCCGCCGGTGGCGGTGGGCTACGCCGGCCTCAAGGATCGTCATGCGGTGACCCGGCAGACCTTTTCGGTGCAACTGGCCGGTCGGCCCGATCCGGATTGGTCGACGTTTCCGCACCCGGAAGTGAAGGTGCTGGCGGCGAGGCGGCACTCACGCAAGCTCAAGCGCGGCGCGTTGCGCGGCAACCGCTTCGTGCTGGTGTTGCGCGAGGTGAACGGCGATCGCGTGCAGGCGGAGTCGGTACTGCAGCAGATCGCCGCGCGCGGCGTGCCGAACTATTACGGCGAGCAGCGCTTCGGCCGCGAAGGCAGCAACGTGGCGCAGGCGCGCGCGATGTTCGGCGGCCGCCGGGTGGATCGGGACAAGCGTTCGTTCCTGTTGTCCGCGGCGCGCTCGCACATCTTCAACGCCGTGCTGGCGGCGCGGGTCGAACGCGATGCGTGGGACCGGCCGCTGGACGGCGAAATCTGGTCGCTGGCCGGTTCGCGCTCATGGTTCGGGCCGGAACCGTTCAACGACGATCTGGCCGCGCGACTGGCGCGCGCCGACATCCATCCCTCAGGCCCGCTGTGGGGGCAGGGCGAGCCGCCGAGCCAGGGCGATGCCGGGGCGCTGGAGCGCGAAGTTGCTGCGGCAAACGAAGACCTCGTCACCGGCCTGGCCGCCGCGCGCATGGACCAGGAACGCCGCCCGTTGCGACTGATTCCGCACAACCTCCGCTGGCGCTGGCAAGGCGACGACGCGCTGGAACTGTCGTTCGAATTGCCGCCTGGCGCATACGCCACGGTGGTGGTGCGCGAGCTGGCGAAAGGCGAGGAGTGA
PROTEIN sequence
Length: 338
MQELPRAFGEPPLTARLRASPEDFLVEEILGYDADGAGEHLLLWVEKRGANTDWVARELAKFAGVPPVAVGYAGLKDRHAVTRQTFSVQLAGRPDPDWSTFPHPEVKVLAARRHSRKLKRGALRGNRFVLVLREVNGDRVQAESVLQQIAARGVPNYYGEQRFGREGSNVAQARAMFGGRRVDRDKRSFLLSAARSHIFNAVLAARVERDAWDRPLDGEIWSLAGSRSWFGPEPFNDDLAARLARADIHPSGPLWGQGEPPSQGDAGALEREVAAANEDLVTGLAAARMDQERRPLRLIPHNLRWRWQGDDALELSFELPPGAYATVVVRELAKGEE*