ggKbase home page

scnpilot_solids2_trim150_scaffold_3650_curated_8

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(9901..11022)

Top 3 Functional Annotations

Value Algorithm Source
LysM domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 373.0
  • Bit_score: 679
  • Evalue 1.80e-192
LysM domain-containing protein {ECO:0000313|EMBL:EIL98620.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 373.0
  • Bit_score: 679
  • Evalue 2.50e-192
LysM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 373.0
  • Bit_score: 672
  • Evalue 6.80e-191

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGATCAGAAAGACAATCGTGTTGCTGGCCGGCATGCTGGTCACCCTGACCATCTATGCCGCAGGCGCGCAGTTGCGTGCCGATCACCCCGACAGCTACACCGTCCGTCGCGGCGACACGTTGTGGGATATTTCCGCCAAGTTCCTGTCCAAGCCCTGGCTGTGGCCGGAGATCTGGCAGGCCAACCCGCAGGTGCGCAACCCGCACCTGATCTATCCGGGCGACGTGCTCAACCTGTCCTTCATCAACGGCCCTAGCCTGCGGCTGCAGCCCGGCGTGCATCGCGAGGGCGAGGCGGTGCCGGCGATCCCGCTCAGCCAGCTGAAGATGTTCCTGAAGGACATGCGGGTGATGGATTCCAACGCGGTCAGTTCCGCGCCCTACGTGGTCGGCCTGGAGGAGAACCGCCTGCGCGGCGCCGTCGGCCAGAGCCTGTACGTGCGCGGCCTGCAGGGCGAGCCGGGCCAGCGCTGGGCGATCGTGCGGCCCAGCCACGTGTTCCGCGGTTTCGACCAGGACGACGCAGCCAGCGCCGATCTGGTCGCCCACAACCTGGACAGCAACGCGGCGATGGTCAATGCGCCGTGGCGCGAGGATTCGCGCAACGACGGCCACTACGGCAAGGGCGACGACCTCGGTGTCGAGGTGACGGTGATCGGCACCGCCGAGACCCTGCGCACCGGTGATCCGGCCACCCTGCTGCTGCTCGACTCCACCCGCGAGATCCGCAGCGGCGACCGCATCATGCCGGTCGACGACCATCCCTACGACGCGTACTACTACCCGCATGCGCCGAAGTCGCTGCCGGCCGGCGCCAAGGTGATCGGTTTCGCCGACGCCCTGCGCGCGGTGGGTTCGCGCCAGGTGGTGCTGCTCTCGGTGGGCGCCCGTGACGGCATCGACAACGGCAGCACGTTCTCGATCTTCGAGCCGGGCGAGACCATCCACGACGACGTGGCCAGCAACAGCTGGAACCGCGGCGTGGGCAAGACGGTGACGCTGCCGTCGGAGTACGTCGGGCACGTCATGGTGTTCCGCACCTTCGACCGGGTCAGCTACGGCCTGGTGATGGACAGCCTGCGTCCGGTGCATGCCGGCGGCCTGCTGGCCATGCCCGAATAA
PROTEIN sequence
Length: 374
MIRKTIVLLAGMLVTLTIYAAGAQLRADHPDSYTVRRGDTLWDISAKFLSKPWLWPEIWQANPQVRNPHLIYPGDVLNLSFINGPSLRLQPGVHREGEAVPAIPLSQLKMFLKDMRVMDSNAVSSAPYVVGLEENRLRGAVGQSLYVRGLQGEPGQRWAIVRPSHVFRGFDQDDAASADLVAHNLDSNAAMVNAPWREDSRNDGHYGKGDDLGVEVTVIGTAETLRTGDPATLLLLDSTREIRSGDRIMPVDDHPYDAYYYPHAPKSLPAGAKVIGFADALRAVGSRQVVLLSVGARDGIDNGSTFSIFEPGETIHDDVASNSWNRGVGKTVTLPSEYVGHVMVFRTFDRVSYGLVMDSLRPVHAGGLLAMPE*