ggKbase home page

scnpilot_solids2_trim150_scaffold_2632_curated_9

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(6881..8275)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 513.0
  • Bit_score: 750
  • Evalue 1.10e-213
pseudouridine synthase family protein (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 506.0
  • Bit_score: 738
  • Evalue 9.50e-211
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW74_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 513.0
  • Bit_score: 750
  • Evalue 7.70e-214

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGACTGCGCCGCAGAAATCCGTTCTTACCCTGAAGCGCGACACGCGCCCCGCCGCCGATGGCCCCGTCCTGGAGGAGCGCCTGCACAAGGTGCTCGCCAACGCCGGCCTCGGCTCGCGCCGCATGCTGGAGCAGCGCATCCAGGCCGGGGAGATCGAGCTCAACGGCAGCCCCGCCGGGATCGGCATGAGCGTCAAGGCCGGCGACCGCGTGGTCATGGACGGCAAGCAGTTCGTGGTGGCCACCGACAACCGCGACGACGCCGAAGTGCTGATCTACCACAAGCCCGAAGGCGTGCTGACCACCCGCGAGGACCCCGAAGGCCGGCCGACCGTGTTCGAGCAGTTGCCGCAGCTGAAAGGCGCGCGCTGGGTCGCCGTGGGCCGGCTGGACATCAACACCACCGGCCTGTTGCTGCTGACCACCGACGGCGAGCTGGCCAACGGCCTGATGCACCCCAAGAGCGGCATGGAACGCGAATACCTGTGCCGTGTGCATGGCGAAGTGCCGGACGAGGTCATCGAGCGCCTGAAAGCCGGCGTGGAGCTGGAGGACGGCCCTGCCCGCTTCGACGAGATCGCCGTGATCAGCCGCGGCGGCAGCCACAGCTGGTTCCGCGTGGTGATTCGCGAAGGCCGCAACCGCGAAGTGCGCCGGCTGTGGGATTCGCAGGGCTTCCTGGTGAGCCGGCTCAAGCGCATCCGCTACGGCCGCATCGAATTGCCACGCAACCTGCGCCGCGGCGAATGCGAGGCGCTCGACGCCGAGAGCGTCAAGCAGCTGCGCCAGACCAGCGGGCTCGGCCTCGCCCAGCCGGTACTGACACTGAGCCCAATCCTGCACCAGCGCCGCGCCACGCGCGGCGTCACCGAGTATCGCCCGGAGCGCGGCACCGGCAGCGCCTGGACCAGCGGCCAGGACGAGGCGCGTGAGCTGCGTGCCTACGACCGCATCCGCGAAGAACCCGTGCGCGGCCGCAAATCCGCATCGCGCAACGGCCGCGAAGTCAACGGCAACGTGGCGGCACCGGAGCGTGCACCGGGGAATGCGAAGCGGCGCGGCAAGGGTCGCCGCGTGGCGCCGGGTCAGGAGCTGCCTTCGGTGCGCACCTGGTTTGCCGGCGAATCCCGCGATGGCACCCCTCGCCCCGGCGGTCGCCGCGGCCTGGCCGGCTCCACCACCGGCAATCGCGGTGCGGCCGGCGGCCGGTCGCATGGCGGCCCCGCAGCCGGCAACCCGTACGTCGGCAACAACGGCAATCGCGCCCCCGCCAACCGCCCCGGCCACGTCGGTCGTGGCCAGGGCGGCAACCGTGCGCCGGGCAACCCGCGCCCCAAGGGACATGGCGGCGGACGCCCGTCGGGCCGTGGCGGCAACCGTTCCGGCAATCGCTGA
PROTEIN sequence
Length: 465
MTAPQKSVLTLKRDTRPAADGPVLEERLHKVLANAGLGSRRMLEQRIQAGEIELNGSPAGIGMSVKAGDRVVMDGKQFVVATDNRDDAEVLIYHKPEGVLTTREDPEGRPTVFEQLPQLKGARWVAVGRLDINTTGLLLLTTDGELANGLMHPKSGMEREYLCRVHGEVPDEVIERLKAGVELEDGPARFDEIAVISRGGSHSWFRVVIREGRNREVRRLWDSQGFLVSRLKRIRYGRIELPRNLRRGECEALDAESVKQLRQTSGLGLAQPVLTLSPILHQRRATRGVTEYRPERGTGSAWTSGQDEARELRAYDRIREEPVRGRKSASRNGREVNGNVAAPERAPGNAKRRGKGRRVAPGQELPSVRTWFAGESRDGTPRPGGRRGLAGSTTGNRGAAGGRSHGGPAAGNPYVGNNGNRAPANRPGHVGRGQGGNRAPGNPRPKGHGGGRPSGRGGNRSGNR*