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scnpilot_solids2_trim150_scaffold_4031_curated_3

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2154..2711)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA n=2 Tax=Rhodanobacter denitrificans RepID=M4NJC6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 185.0
  • Bit_score: 215
  • Evalue 6.10e-53
lipopolysaccharide transport periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 185.0
  • Bit_score: 215
  • Evalue 1.90e-53
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:AGG90207.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 185.0
  • Bit_score: 215
  • Evalue 8.60e-53

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
GTGCTGGGGGCACTGCTGCTGCAGCCCGCCCTGGCCAGGAAGGATGACCGCAGCCAGCCGATGCGGGTGGTGCATGCCGACTCGTTCAGCGGCTTCAACGCGCCCAACAGCATCACCACGCTCAACGGCAATGTCGAACTGAGCCAGGGCACGCTGAAGATCACCGGCGACCTGGCCAAGATCCACGTCGACGGCAACCAGCAACTGAGCCGCATCGTGGTCACCGGCAACGCCCACATCCAGCAACTGGACGACGCCGGCAACCTGATGTCCGGCGACGCGCGCACGCTCGACTACGACAACATCAAGGGCATCGCCACGCTTCAGGGCCAGGCCTCGGTGCACCAGCAGGGTCGCGGCGAAGCGCACGGCGACACCCTCACCTACAACACGCAGACCAGCGAGATGACCGGCAGCAGCGGCAACGACGGCATGGTGCACATGATCTTCCTGCCCAAGCCGCAGCCCGCTCCCGCGCACTCCGCCCCCGCCCCCGCATCCTCCGCCGCGGCGCCGGCCGCCGCGGCCAGCAGCCCGGCGCCGCAGGGGCAGCGCTGA
PROTEIN sequence
Length: 186
VLGALLLQPALARKDDRSQPMRVVHADSFSGFNAPNSITTLNGNVELSQGTLKITGDLAKIHVDGNQQLSRIVVTGNAHIQQLDDAGNLMSGDARTLDYDNIKGIATLQGQASVHQQGRGEAHGDTLTYNTQTSEMTGSSGNDGMVHMIFLPKPQPAPAHSAPAPASSAAAPAAAASSPAPQGQR*