ggKbase home page

scnpilot_solids2_trim150_scaffold_24738_curated_1

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 3..1061

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY66_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 343.0
  • Bit_score: 638
  • Evalue 5.50e-180
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL92157.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 343.0
  • Bit_score: 638
  • Evalue 7.80e-180
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 345.0
  • Bit_score: 624
  • Evalue 2.60e-176

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
CGAGGTCCAGCGGTGCGCAGCGCCACCATCAAGGATGTCGCGGAACGGGCAGGCGTCTCGCTGAAGACGGTGTCGCGCGTCATCAACAACGAGCCCTCGGTACATGCGCGCACGCGCGAGCGGGTGCAACAGGCGATCGACGCGCTCGGCTACCAGCCCGATCCCACCGCGCGCAGCCTGCGCAGCACGCGCGCCTACGCGATCGGCCTGGTCTACGACAACCCCAACGCGCACTACATCATCAACCTGCAGCGCGGCGTGCTGTCGGTGTGCCGTTCCAGCGGCTTCGGCCTGCAGATCCATCCCTGCGATTCATCCTCGCCGAAGCTCGCCGAGGAGCTGTGCACGCTGGTGCGCCGCTCGCATCTGGCCGGGCTGGTGCTGGCGCCGCCGATGTCCGAGCAGCCCGGGCTGATCCAGGCGCTGAGCGACGCCGGGATTCCCTTCATCCGCATCATCTCCGCGCGCAAGGACCCGGCCGACGGCTATCCCTGCGTCTACGTGGACGACCGCGACGCGGCCTACGCGATCACCGAACACCTGATCCAGCTCGGCCACCAGCGCATCGGCTTCCTGTGGGGCGGACGCGAGCATCGCTCCAGCCCGGAACGCTACCAGGGCTACGAGGACGCGCTGAAGGACTACGGCATCCCGCTCGACCGCAAGCTGGTCCTGCCCGGCGACTTCACCTTCGACGACGGCTTCCGCGGCGCGCGCAAGCTGCTGGCGCTGAAGGACCGGCCCACCGCGATCTTCGGCTCCAACGACGAGATCGCCGCCGGCGTGCTGGCCGCGGCGCACTCGGACGGCATCAACGTGCCGTACGAGCTTTCCATCGCCGGCTTCGAGGACAGCCCGTTCTCCAAGCAATCCTGGCCGGCGCTGACCACCGCGCGCCAGGCCACCGAGGAGATCGCCCGCCACGCCGCGCAGCGCCTGATCGGCGACCTGCAACGCGCCGCCCACGGCGAGCCGGCCACCACCCGCAATGAAGGATTCAGTCCGGAGCTGGTGGTGCGCGGTTCCACTGCACCGCGGCACGGCACCTCGCGGCGCTGA
PROTEIN sequence
Length: 353
RGPAVRSATIKDVAERAGVSLKTVSRVINNEPSVHARTRERVQQAIDALGYQPDPTARSLRSTRAYAIGLVYDNPNAHYIINLQRGVLSVCRSSGFGLQIHPCDSSSPKLAEELCTLVRRSHLAGLVLAPPMSEQPGLIQALSDAGIPFIRIISARKDPADGYPCVYVDDRDAAYAITEHLIQLGHQRIGFLWGGREHRSSPERYQGYEDALKDYGIPLDRKLVLPGDFTFDDGFRGARKLLALKDRPTAIFGSNDEIAAGVLAAAHSDGINVPYELSIAGFEDSPFSKQSWPALTTARQATEEIARHAAQRLIGDLQRAAHGEPATTRNEGFSPELVVRGSTAPRHGTSRR*